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Table 4 Proteins up-regulated by glucose

From: Comparative proteomic analysis of transition of saccharomyces cerevisiae from glucose-deficient medium to glucose-rich medium

A

Name

115:113

P

115:114

P

116:113

P

116:114

P

Ave

SD

t-test

Rps0bp, 40S Ribosomal Subunit

2.1677

0.0324

2.2909

0.0133

1.9588

0.0369

2.0324

0.0152

2.1125

0.1274

0.0006

Rps8bp, 40S Ribosomal Subunit

2.3768

0.0015

3.8726

0.0006

1.7865

0.0080

2.8576

0.0008

2.7234

0.7643

0.0298

Rpl3p, 60S Ribosomal Subunit

1.3428

0.0266

1.5136

0.0005

1.1482

0.2264

1.2942

0.0056

1.3247

0.1305

0.0230

Rpl7bp, 60S Ribosomal Subunit

1.9950

0.0129

1.7380

0.0241

1.8540

0.0121

1.6290

0.0320

1.8040

0.1360

0.0020

Tef2p, Translational Elongation Factor EF-1 alpha

2.4434

0.0134

2.3550

0.0422

2.2491

0.0146

2.1677

0.0254

2.3038

0.1044

0.0002

Tef4p, Translational Elongation Factor eEF1B

2.5586

0.0441

1.9588

0.0281

2.5119

0.0528

1.9231

0.0275

2.2381

0.2979

0.0055

Lia1p, Deoxyhypusine Hydroxylase

2.9107

0.0115

3.3113

0.0081

2.6546

0.0169

3.0479

0.0116

2.9811

0.2372

0.0007

Pma1p, Plasma Membrane H+-ATPase

1.4859

0.0112

2.0701

0.0020

1.5276

0.0224

2.1281

0.0032

1.8029

0.2972

0.0184

B

Accession #

Name

Peptides (95%)

113:114

P

115:116

P

t-test

gi|6323077

Rps0bp, 40S Ribosomal Subunit

12

1.0471

0.5788

1.0864

0.9352

0.1823

gi|6320949

Rps8bp, 40S Ribosomal Subunit

14

1.6596

0.2979

1.3428

0.4164

0.1949

gi|6324637

Rpl3p, 60S Ribosomal Subunit

23

1.1272

0.0651

1.1695

0.2455

0.0902

gi|6325058

Rpl7bp, 60S Ribosomal Subunit

14

0.8318

0.6646

1.0186

0.8621

0.5701

gi|99031872

Tef2p, Translational Elongation Factor EF-1 alpha

63

0.9727

0.8135

1.0666

0.9691

0.7477

gi|6322769

Tef4p, Translational Elongation Factor eEF1B

10

0.7244

0.7899

1.0000

0.9030

0.5000

gi|6322531

Lia1p, Deoxyhypusine Hydroxylase

4

1.1588

0.7297

1.0765

0.7288

0.2142

gi|6321430

Pma1p, Plasma Membrane H+-ATPase

12

1.4454

0.5425

0.9462

0.8061

0.5765

  1. (A) Proteins that increased their relative levels in response to glucose re-feeding. Average ratios (Avg) and standard deviations (SD) are given, along with the p-values (P) calculated for each protein's ratio by ProteinPilotTM 4.0 based on the ratios of each identified peptide. A one-sample Student's t-test was used to confirm that each protein's set of ratios for all four comparisons was significantly different from 1 and all p-values are <0.05.
  2. (B) Ratios of 113:114; starved:starved and 115:116; re-fed:re-fed with the number of distinct peptides having at least 95% confidence and a p-value (P) greater than 0.05 calculated for each protein's ratio by ProteinPilotTM 4.0 based on the ratios of each identified peptide. A one-sample Student's t-test was used to confirm that each protein's set of ratios for both comparisons was not significantly different from 1 and all p-values are >0.05.
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