Table 2 Statistical data for MMS-induced differentially expressed proteins in chromatin fraction.
From: Differential chromatin proteomics of the MMS-induced DNA damage response in yeast
Protein name | DF | p-value (DF) | EF (+MMS) | p-value (EF, +MMS) | EF (-MMS) | p-value (EF, -MMS) |
|---|---|---|---|---|---|---|
Acf2 | +1.48 | 0.020 | +1.57 | 0.011 | -1.30 | 0.048 |
Aim13 | +1.70 | 0.0053 | +3.30 | 0.034 | +2.27 | 0.00097 |
Arp3 | +1.35 | 0.024 | N/A | N/A | +1.52 | 0.063 |
Atp2 | +1.52 | 0.0093 | +1.50 | 0.093 | +5.74 | 0.000041 |
Bmh1 (a) | +1.92 | 0.0014 | +3.57 | 0.0039 | -1.03 | 0.070 |
Cdc10 (a) | +1.61 | 0.0034 | +7.28 | 0.0099 | +6.33 | 0.000015 |
Cdc10 (b) | +1.38 | 0.044 | +1.50 | 0.18 | +2.43 | 0.0015 |
Cps1 | +1.61 | 0.010 | +2.16 | 0.0036 | -2.57 | 0.00018 |
Crn1 | +1.78 | 0.0034 | +3.85 | 0.0024 | +2.36 | 0.0012 |
Gcv3 | +1.75 | 0.019 | +1.07 | 0.52 | -1.90 | 0.00087 |
Ilv2 | +2.15 | 0.013 | +1.50 | 0.39 | -1.15 | 0.086 |
Lsp1 (a) | +1.51 | 0.0023 | +3.17 | 0.0011 | +1.79 | 0.022 |
Lsp1 (b) | +1.84 | 0.0046 | +3.69 | 0.00072 | -1.71 | 0.0078 |
Nsp1 | +1.58 | 0.0050 | +3.07 | 0.014 | +1.65 | 0.017 |
Pil1 | +2.05 | 0.0013 | +9.60 | 0.0068 | +2.65 | 0.036 |
Pst2 (a) | +1.50 | 0.0023 | +3.99 | 0.0074 | +1.55 | 0.0019 |
Pst2 (b) | +3.83 | 0.0013 | +4.50 | 0.0074 | -1.02 | 0.14 |
Rpa1 | +3.58 | 0.00070 | +4.16 | 0.010 | -1.33 | N/A |
Rpa2 | +1.47 | 0.036 | +2.50 | 0.015 | -1.12 | 0.089 |
Ste4 | +1.61 | 0.023 | +2.32 | 0.000092 | -1.00 | 0.16 |
Vma2 (a) | +1.92 | 0.0052 | +1.59 | 0.0063 | -1.34 | 0.00019 |
Vma2 (b) | +1.48 | 0.018 | +1.64 | 0.0041 | -1.58 | 0.00018 |
Vma2 (c) | +1.53 | 0.0097 | +1.65 | 0.021 | +1.10 | 0.050 |
Vma4 | +1.85 | 0.010 | +1.58 | 0.0048 | -1.08 | 0.070 |
Ycp4 (a) | +2.01 | 0.00070 | +5.40 | 0.00073 | +1.76 | 0.00050 |
Ycp4 (b) | +1.69 | 0.037 | +5.31 | 0.00063 | +1.18 | 0.13 |
Yrb1 | +2.05 | 0.025 | +5.07 | 0.0011 | +1.77 | 0.0040 |
Hsp31 | +1.63 | 0.0063 | -1.64 | 0.0051 | -1.84 | 0.000062 |
Rnr4 (a) | +1.91 | 0.0014 | -1.24 | 0.25 | -1.47 | 0.013 |
Rnr4 (b) | +3.90 | 0.000057 | -2.08 | 0.012 | -3.11 | 0.00011 |
Rnr4 (c) | +3.89 | 0.000057 | -1.17 | 0.27 | -2.23 | 0.00025 |
Rnr4 (d) | +2.41 | 0.0023 | -1.06 | 0.74 | +1.30 | 0.015 |
Ald6 | -1.84 | 0.00056 | -2.21 | 0.021 | -1.81 | 0.00014 |
Bgl2 | -1.85 | 0.00068 | -1.54 | 0.17 | +7.02 | 0.000022 |
Bmh1 (b) | -1.43 | 0.0020 | -1.53 | 0.0071 | -1.07 | 0.059 |
Bmh2 | -1.90 | 0.0020 | -2.08 | 0.021 | -1.06 | 0.069 |
Hsp60 | -1.72 | 0.00017 | -1.56 | 0.091 | +1.31 | 0.0079 |
Pdc1 | -1.69 | 0.00022 | -2.27 | 0.013 | -2.64 | 0.000099 |
Rpc40 | -1.53 | 0.0016 | +2.31 | 0.013 | +3.98 | 0.000015 |
Rpp0 | -1.70 | 0.00056 | -2.15 | 0.028 | -1.61 | 0.00037 |
Ssb1 | -1.62 | 0.0084 | -1.41 | 0.12 | -1.27 | 0.00027 |
Ssb2 | -1.83 | 0.0092 | +2.01 | 0.018 | +1.45 | 0.0090 |
Tma19 | -1.93 | 0.0027 | -3.00 | 0.036 | -1.02 | 0.14 |
Ura7 | -1.85 | 0.0027 | +6.01 | 0.059 | +3.73 | 0.000022 |