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Figure 2 | Proteome Science

Figure 2

From: An automated growth enclosure for metabolic labeling of Arabidopsis thaliana with 13C-carbon dioxide - an in vivo labeling system for proteomics and metabolomics research

Figure 2

Amino acid enrichment and turnover in the leaves of Arabidopsis plants labeled with 13 CO 2 . Arabidopsis seedlings were grown in the enclosure with 99 atom% 13CO2 for three weeks from seed then chased with ambient air (containing 12CO2) for different durations before sampling for amino acid analyses using GC-MS. Data from 3 amino acids, cysteine, asparagine and arginine, were not shown. The half-lives of amino acids were calculated by non-linear regression assuming a simple exponential decay process with no plateau. The percent 13C enrichment is given as the number listed parenthetically above the bars for each amino acid. A graph inside this figure shows the diminution of a heavy fragment ion (m/z 163) and emergence of the light fragment ion (m/z 160) of the derivatized [13C]-labeled aspartic acid (Asp) during the isotopic dilution period. The elemental composition of this specific fragment ion was determined to be C6H10NO4; but in the fragment only C3H4N1 originated from the amino acid and the remainder of the elements were from the derivatization reagent.

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