Skip to main content

Table 2 Average precision

From: SProt: sphere-based protein structure similarity algorithm

Method

Mean average precision

Average precision for standard recall levels

SProt

88.3

86.9

Vorometric

n/a

82.91

CE

83.4

80.9

MAMMOTH

82.1

80.8

3D-BLAST

78.2

76.2

PSI-BLAST

69.8

61.8

  1. The experiments was performed against the ProtDex2 dataset and all 108 queries were utilized. The mean average precision values of the compared methods are taken from [14], and the average precision for standard recall levels values of the compared methods are taken from [10].
  2. 1 based on returning top 100 hits
Back to article page

Proteome Science

ISSN: 1477-5956