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  1. Research

    Gender-specific effects of intrauterine growth restriction on the adipose tissue of adult rats: a proteomic approach

    Intrauterine growth restriction (IUGR) may program metabolic alterations affecting physiological functions and lead to diseases in later life. The adipose tissue is an important organ influencing energy homeos...

    Adriana Pereira de Souza, Amanda Paula Pedroso, Regina Lúcia Harumi Watanabe, Ana Paula Segantine Dornellas, Valter Tadeu Boldarine, Helen Julie Laure, Claudia Maria Oller do Nascimento, Lila Missae Oyama, José Cesar Rosa and Eliane Beraldi Ribeiro

    Proteome Science 2015 13:32

    Published on: 2 December 2015

  2. Research

    Hepatocytes respond differently to major dietary trans fatty acid isomers, elaidic acid and trans-vaccenic acid

    It has been discussed if the adverse health effect associated with the ingestion of trans fatty acids correlates with the food source, as the composition of the isomers varies in different foods. We have investig...

    Toke P. Krogager, Lone Vendel Nielsen, Derya Kahveci, Thomas F. Dyrlund, Carsten Scavenius, Kristian W. Sanggaard and Jan J. Enghild

    Proteome Science 2015 13:31

    Published on: 1 December 2015

  3. Research

    Differential abundance analysis of mesocarp protein from high- and low-yielding oil palms associates non-oil biosynthetic enzymes to lipid biosynthesis

    The oil palm Elaeis guineensis Jacq. which produces the highest yield per unit land area of the oil crops is the most important commercial oil crop in South East Asia. The fleshy mesocarp of oil palm fruit, where...

    Tony Eng Keong Ooi, Wan Chin Yeap, Leona Daniela Jeffery Daim, Boon Zean Ng, Fong Chin Lee, Ainul Masni Othman, David Ross Appleton, Fook Tim Chew and Harikrishna Kulaveerasingam

    Proteome Science 2015 13:28

    Published on: 26 November 2015

  4. Methodology

    Beads-free protein immunoprecipitation for a mass spectrometry-based interactome and posttranslational modifications analysis

    Protein immunoprecipitation (IP) coupled with MS provides means to interrogate protein complexes and their posttranslational modifications (PTMs). In a typical protein IP assay antibodies are conjugated to pro...

    Michal Mikula, Tymon Rubel, Jakub Karczmarski, Malgorzata Statkiewicz, Karol Bomsztyk and Jerzy Ostrowski

    Proteome Science 2015 13:23

    Published on: 2 September 2015

  5. Research article

    Proteome analysis of shell matrix proteins in the brachiopod Laqueus rubellus

    The calcitic brachipod shells contain proteins that play pivotal roles in shell formation and are important in understanding the evolution of biomineralization. Here, we performed a large-scale exploration of ...

    Yukinobu Isowa, Isao Sarashina, Kenshiro Oshima, Keiji Kito, Masahira Hattori and Kazuyoshi Endo

    Proteome Science 2015 13:21

    Published on: 15 August 2015

  6. Research article

    Proteomic study of different culture medium serum volume fractions on RANKL-dependent RAW264.7 cells differentiating into osteoclasts

    Cultivation of osteoclasts is a basic tool for investigating osteolytic bone diseases. Fetal bovine serum (FBS) is the standard supplement used for in vitro cell culture medium. Typically, the serum volume fracti...

    Qi Xiong, Lihai Zhang, Lingli Xin, Yanpan Gao, Ye Peng, Peifu Tang and Wei Ge

    Proteome Science 2015 13:16

    Published on: 2 May 2015

  7. Research article

    Comparative proteomics of Bt-transgenic and non-transgenic cotton leaves

    As the rapid growth of the commercialized acreage in genetically modified (GM) crops, the unintended effects of GM crops’ biosafety assessment have been given much attention. To investigate whether transgenic ...

    Limin Wang, Xuchu Wang, Xiang Jin, Ruizong Jia, Qixing Huang, Yanhua Tan and Anping Guo

    Proteome Science 2015 13:15

    Published on: 2 May 2015

  8. Research article

    One-dimensional proteomic profiling of Danio rerio embryo vitellogenin to estimate quantum dot toxicity

    Vitellogenin (Vtg) is the major egg yolk protein (YP) in most oviparous species and may be useful as an indicator in ecotoxicological testing at the biochemical level. In this study, we obtained detailed infor...

    Natalia A Petushkova, Galina P Kuznetsova, Olesya V Larina, Yulia S Kisrieva, Natalia F Samenkova, Oxana P Trifonova, Yuliana V Miroshnichenko, Konstantin V Zolotarev, Irina I Karuzina, Olga M Ipatova and Andrey V Lisitsa

    Proteome Science 2015 13:17

    Published on: 2 May 2015

  9. Research

    Label-free quantitative phosphorylation analysis of human transgelin2 in Jurkat T cells reveals distinct phosphorylation patterns under PKA and PKC activation conditions

    Transgelin2, one of cytoskeletal actin binding proteins has recently been suggested to be involved in the formation of immune synapses. Although detailed function of transgelin2 is largely unknown, interaction...

    Se Hwan Jang, Chang-Duk Jun and Zee-Yong Park

    Proteome Science 2015 13:14

    Published on: 26 March 2015

  10. Research article

    Differential effects of dopamine signalling on long-term memory formation and consolidation in rodent brain

    Using auditory discrimination learning in gerbils, we have previously shown that activation of auditory-cortical D1/D5 dopamine receptors facilitates mTOR-mediated, protein synthesis-dependent mechanisms of me...

    Nicole Reichenbach, Ulrike Herrmann, Thilo Kähne, Horst Schicknick, Rainer Pielot, Michael Naumann, Daniela C Dieterich, Eckart D Gundelfinger, Karl-Heinz Smalla and Wolfgang Tischmeyer

    Proteome Science 2015 13:13

    Published on: 18 March 2015

  11. Research article

    A preliminary quantitative proteomic analysis of glioblastoma pseudoprogression

    Pseudoprogression disease (PsPD) is commonly observed during glioblastoma (GBM) follow-up after adjuvant therapy. Because it is difficult to differentiate PsPD from true early progression of GBM, we have used ...

    Peng Zhang, Zhengguang Guo, Yang Zhang, Zhixian Gao, Nan Ji, Danqi Wang, Lili Zou, Wei Sun and Liwei Zhang

    Proteome Science 2015 13:12

    Published on: 12 March 2015

  12. Research article

    New interaction partners for Nek4.1 and Nek4.2 isoforms: from the DNA damage response to RNA splicing

    Neks are serine-threonine kinases that are similar to NIMA, a protein found in Aspergillus nidulans which is essential for cell division. In humans there are eleven Neks which are involved in different biological...

    Fernanda Luisa Basei, Gabriela Vaz Meirelles, Germanna Lima Righetto, Deivid Lucas dos Santos Migueleti, Juliana Helena Costa Smetana and Jörg Kobarg

    Proteome Science 2015 13:11

    Published on: 26 February 2015

  13. Research article

    Towards further defining the proteome of mouse saliva

    Knowledge of the mouse salivary proteome is not well documented and as a result, very limited. Currently, several salivary proteins remain unidentified and for some others, their function yet to be determined....

    Anne A Blanchard, Peyman Ezzati, Dmitry Shamshurin, Andreea C Nistor, Etienne Leygue, John A Wilkins and Yvonne Myal

    Proteome Science 2015 13:10

    Published on: 25 February 2015

  14. Research article

    Proteome changes in the small intestinal mucosa of broilers (Gallus gallus) induced by high concentrations of atmospheric ammonia

    Ammonia is a well-known toxicant both existing in atmospheric and aquatic system. So far, most studies of ammonia toxicity focused on mammals or aquatic animals. With the development of poultry industry, ammon...

    Jize Zhang, Cong Li, Xiangfang Tang, Qingping Lu, Renna Sa and Hongfu Zhang

    Proteome Science 2015 13:9

    Published on: 21 February 2015

  15. Research article

    The proteome profiles of the olfactory bulb of juvenile, adult and aged rats - an ontogenetic study

    In this study, we searched for proteins that change their expression in the olfactory bulb (oB) of rats during ontogenesis. Up to now, protein expression differences in the developing animal are not fully unde...

    Michael Wille, Antje Schümann, Michael Kreutzer, Michael O Glocker, Andreas Wree, Grit Mutzbauer and Oliver Schmitt

    Proteome Science 2015 13:8

    Published on: 15 February 2015

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