Skip to main content

Table 1 Differentially modulated proteins (≥ 1.5-fold change in abundance) in embryogenic (NC) and non-embryogenic (NEC) calli compared with corm explants in Crocus sativus.

From: Identification of differentially accumulated proteins associated with embryogenic and non-embryogenic calli in saffron (Crocus sativus L.)

Spot

IDa

The/Expb

Protein name/Organism

Accession Noc

% Cov./Scor.d

PMF/MS-MSe

Abundance ratiof

 

MW

(kDa)

p I

    

NC/

Corm

NEC/

Corm

NC/

NEC

467

75/80

5/4.89

Heat shock protein 70/Cucumis sativus

Q39641

81/556

9/5

1.9**

1.6*

1.1

473

75/79

5/4.85

Heat shock protein 70/Cucumis sativus

Q39641

12/402

6/5

1.6*

1.6*

1.0

535

61/73

5.7/6.27

Heat shock protein 70 (HSP70)-interacting protein, putative/Ricinus communis

B9RBP6

8/98

4/1

5.6**

3.6*

1.5*

542

62/73

5/5.76

Heat shock 70 kDa protein, mitochondrial/Solanum tuberosum

Q08276

18/88

10/1

5.8**

3.6**

1.6**

560

72/70

5.5/5.59

Heat shock 70 kDa protein/Zea mays

B6U4A3

19/375

12/4

6.3**

5.1**

1.2

680

59/61

5.4/5.61

T-complex protein 1 epsilon subunit, putative/TCP-1-epsilon/Arabidopsis thaliana

O04450

8/101

4/3

5.4**

7.4**

-1.4

686

63/62

5.5/5.20

Chaperonin/Arabidopsis thaliana

Q9LJE4

17/226

7/3

-1.5

-1.6*

1.1

727

57/61

5.5/6.24

Chaperonin/Arabidopsis thaliana

Q940P8

20/272

7/4

6.9**

5.3*

1.3

641

60/64

5.97/6.27

Chaperonin containing t-complex/Ricinus communis

B9SUJ3

18/137

9/3

6.1**

5.1*

1.2

676

62/63

6.6/5.03

Rubisco large subunit-binding protein/Brassica napus

P21241

10/96

4/2

˃

˃

1.3

1188

47/50

6.9/5.55

Glutamine synthetase precursor/Glycine max

Q95AG1

16/378

7/4

5.6**

4.6**

1.2

1297

39/47

5.3/5.73

Glutamine synthetase/Raphanus sativus

O24334

17/310

5/3

4.4**

3.8**

1.2

1729

20/34

9.7/5.37

Glutathione S-transferase/Gossypium barbadense

A7KP03

6/79

1/1

˃

˃

-1.4*

1656

20/36

9.7/5.01

Glutathione S-transferase/Gossypium barbadense

A7KP03

6/86

1/1

˃

˃

-1.2

1950

26/29

6.2/6.04

Glutathione S-transferase U20/Arabidopsis thaliana

Q8L7C9

11/80

3/2

˃

˃

-1.3

1036

47/54

4.8/5.15

26S protease regulatory subunit 6A homolog/Solanum Lycopersicum

P54776

27/541

15/7

4.0**

3.8*

1.0

1042

47/54

4.8/5.08

26S protease regulatory subunit 6A homolog/Solanum Lycopersicum

P54776

29/516

16/9

5.9**

4.3**

1.4

1136

42/51

6/6.05

dTDP-glucose 4-6-dehydratase/Ricinus communis

B9SZ78

35/381

15/4

3.0*

4.2**

-1.4

1147

42/51

5.8/6.18

GDP-D-mannose-3',5'-epimerase/Malpighia glabra

A0EJL8

15/108

6/3

˃

˃

1.4*

275

99/99

5.8/6.03

Aconitase/Ricinus communis

B9SXB6

7/85

6/2

9.1**

8.6**

1.0

1756

34/33

9.7/5.12

6-phosphogluconolactonase, putative/Ricinus communis

B9RWU6

12/86

2/1

-9.1**

-7.7**

1.2

1443

35/43

4.9/4.91

Probable fructokinase-2/Arabidopsis thaliana

Q9LNE3

22/182

7/3

˃

˃

1.2

1199

51/50

5.8/5.61

Elongation factor Tu, chloroplastic/Arabidopsis thaliana

P17745

16/360

5/5

1.8**

1.4ns

1.3

1868

92/31

5.8/5.14

Initiation factor eIF-4 gamma, middle; Up-frameshift suppressor2/Medicago truncatula

Q2HSQ9

63/72

5/0

˃

˃

-1.4*

1644

32/37

5.69/6.56

Isoflavone reductase-like1/Zea mays

P52580

7/85

2/1

˃

˃

-1.1

1596

33/39

5.76/6.04

Isoflavone reductase-like protein 5/Vitis vinifera

Q3KN68

15/123

3/1

˃

˃

-1.1

1622

34/38

6/6.02

Isoflavone reductase related protein/Pyrus communis

O81355

11/147

2/2

˃

˃

1.2

896

45/57

5.9/5.14

RNA binding protein 45/Nicotiana plumbaginifolia

Q9LEB4

3/88

1/1

4.7*

5.2*

-1.1

297

90/97

5.28/5.13

Cell division control protein 48 homolog A/Arabidopsis thaliana

P54609

22/238

12/5

4.2*

3.7**

1.1

1816

22/33

5.9/6.72

Cysteine proteinase inhibitor 6/Arabidopsis thaliana

Q8H0X6

25/155

5/2

2.9*

3.7**

1.2

584

84/70

9.4/5.1

Putative uncharacterized protein/Oryza sativa Japonica Group

B9FCS8

6/121

4/3

˃

˃

1.4

621

61/67

5.29/5.7

Phosphoglyceromutase/Mesembryanthemum crystallinum

Q42908

13/191

5/2

˃

˃

1.2

1750

27/34

5.2/5.5

Caffeoyl-CoA O-methyltransferase/Solanum tuberosum

Q8H9B6

45/488

10/4

˃

˃

-2.7**

1752

42/35

9.3/6.1

Ascorbate peroxidase/Lycopersicon esculentum

Q8LSK6

20/268

6/3

˃

˃

1.1

2150

8.8/19

4.8/4.8

Copper chaperone/Zea mays

B6T1K0

32/211

3/3

˃

˃

-1.4

2192

36/18

6.3/6.2

Cys/Met metabolism PLP-dependent enzyme family protein/Oryza sativa (japonica cultivar-group)

Q10KP3

13/76

6/0

˃

˃

-2*

  1. a) The numbering corresponds to the match IDs in 2D gels.
  2. b) Theoretical/Experimental MW (kDa) and pI.
  3. c) Accession number in Uni-Prot.
  4. d) Percent of sequence coverage and Mascot score resulted from combined MS-MS/MS search.
  5. e) Number of peptide identified by PMF and MS/MS.
  6. f) Fold change in abundance levels, * (p ≤ 0.05), ** (p ≤ 0.01)
Back to article page

Proteome Science

ISSN: 1477-5956