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Table 2 List with the proteins that were differentially identified by LC-MS/MS analysis of the plasma membranes of undifferentiated (−) and differentiated (+) cells (experiment #2)
| Proteins identified only in (-) cells | |
|---|---|
| Protein Accession # | Protein_description |
| gi|458470 | carboxylesterase [Homo sapiens] |
| gi|62088648 | tumor rejection antigen (gp96) 1 variant [Homo sapiens] |
| gi|28614 | aldolase A [Homo sapiens] |
| gi|18645167 | Annexin A2 [Homo sapiens] |
| gi|31179 | enolase [Homo sapiens] |
| gi|34707 | Manganese superoxide dismutase [Homo sapiens] |
| gi|4502013 | adenylate kinase 2, mitochondrial isoform a [Homo sapiens] |
| gi|178390 | aldehyde dehydrogenase [Homo sapiens] |
| gi|4504505 | peroxisomal multifunctional enzyme type 2 isoform 2 [Homo sapiens] |
| gi|4503285 | aldo-keto reductase family 1 member C2 isoform 1 [Homo sapiens] |
| gi|1723158 | dihydrodiol dehydrogenase/bile acid-binding protein [Homo sapiens] |
| gi|6009628 | brain carboxylesterase hBr3 [Homo sapiens] |
| gi|386758 | GRP78 precursor [Homo sapiens] |
| gi|4507913 | wiskott-Aldrich syndrome protein family member |
| Proteins identified only in (+) cells | |
| gi|306891 | 90kDa heat shock protein [Homo sapiens] |
| gi|1633054 | Chain A, Cyclophilin A Complexed With Dipeptide Gly-Pro |
| gi|4507677 | endoplasmin precursor [Homo sapiens] |
| gi|75766275 | Chain A, Crystal Structure Of Human Cypa Mutant K131a |
| gi|61656603 | Heat shock protein HSP 90 - alpha 2 [Homo sapiens] |
| gi|179930 | carboxylesterase [Homo sapiens] |
| gi|2981743 | Chain A, Secypa Complexed With Hagpia (Pseudo-Symmetric Monomer) |
| gi|4757756 | annexin A2 isoform 2 [Homo sapiens] |
| gi|4826898 | profilin-1 [Homo sapiens] |
| gi|342350777 | Chain A, Human Annexin V With Incorporated Methionine Analogue Azidohomoalanine |
| gi|32189394 | ATP synthase subunit beta, mitochondrial precursor [Homo sapiens] |
| gi|157833780 | Chain A, Human Annexin V With Proline Substitution By Thioproline |
| gi|53791219 | filamin A [Homo sapiens] |
| gi|31645 | glyceraldehyde-3-phosphate dehydrogenase [Homo sapiens] |
| gi|14327942 | HSP90B1 protein [Homo sapiens] |
| gi|28614 | aldolase A [Homo sapiens] |
| gi|662841 | heat shock protein 27 [Homo sapiens] |
| gi|999892 | Chain A, Crystal Structure Of Recombinant Human Triosephosphate Isomerase At 2.8 Angstroms |
| Resolution. | |
| gi|35505 | pyruvate kinase [Homo sapiens] |
| gi|693933 | 2-phosphopyruvate-hydratase alpha-enolase [Homo sapiens] |
| gi|4503483 | elongation factor 2 [Homo sapiens] |
| gi|5729877 | heat shock cognate 71 kDa protein isoform 1 [Homo sapiens] |
| gi|4505591 | peroxiredoxin-1 [Homo sapiens] |
| gi|6525069 | tumor necrosis factor type 1 receptor associated protein [Homo sapiens] |
| gi|4502101 | annexin A1 [Homo sapiens] |
| gi|189617 | protein PP4-X [Homo sapiens] |
| gi|4758012 | clathrin heavy chain 1 [Homo sapiens] |
| gi|34419635 | 70kDa heat shock protein 6 [Homo sapiens] |
| gi|4507357 | transgelin-2 [Homo sapiens] |
| gi|577295 | KIAA0088 [Homo sapiens] |
| gi|35830 | ubiquitin activating enzyme E1 [Homo sapiens] |
| gi|6470150 | BiP protein [Homo sapiens] |
| gi|5453790 | nicotinamide N-methyltransferase [Homo sapiens] |
| gi|5803227 | 14-3-3 protein theta [Homo sapiens] |
| gi|38648667 | Fatty acid synthase [Homo sapiens] |
| gi|31746 | glutathione-insulin transhydrogenase (216 AA) [Homo sapiens] |
| gi|1421609 | Chain A, X-Ray Structure Of Nm23 Human Nucleoside Diphosphate Kinase B Complexed With |
| Gdp At 2 Angstroms Resolution | |
| gi|438069 | thiol-specific antioxidant protein [Homo sapiens] |
| gi|61104911 | heat shock protein 90Bb [Homo sapiens] |
| gi|4758304 | protein disulfide-isomerase A4 precursor [Homo sapiens] |
| gi|5802974 | thioredoxin-dependent peroxide reductase, mitochondrial isoform a precursor [Homo sapiens] |
| gi|3318841 | Chain A, Horf6 A Novel Human Peroxidase Enzyme |
| gi|230867 | Chain R, Twinning In Crystals Of Human Skeletal Muscle D- Glyceraldehyde-3-Phosphate |
| gi|230867 | Dehydrogenase |
| gi|5031857 | L-lactate dehydrogenase A chain isoform 1 [Homo sapiens] |
| gi|4507877 | vinculin isoform VCL [Homo sapiens] |
| gi|1710248 | protein disulfide isomerase-related protein 5 [Homo sapiens] |
| gi|5031635 | cofilin-1 [Homo sapiens] |
| gi|83753119 | Chain A, Crystal Structure Of Human Full-Length Vinculin (Residues 1- 1066) |
| gi|157879202 | Chain B, Crystal Structures Of Native And Inhibited Forms Of Human Cathepsin D: Implications |
| For Lysosomal Targeting And Drug Design | |
| gi|74722493 | RecName: Full=Putative heat shock protein HSP 90-alpha A4; AltName: Full=Heat shock 90 kDa |
| gi|74722493 | protein 1 alpha-like 2; AltName: Full=Heat shock protein 90-alpha D |
| gi|181250 | cyclophilin [Homo sapiens] |
| gi|182855 | 80K-H protein [Homo sapiens] |
| gi|37267 | transketolase [Homo sapiens] |
| gi|1065111 | Chain A, High Resolution Solution Nmr Structure Of Mixed Disulfide Intermediate Between |
| Mutant Human Thioredoxin And A 13 Residue Peptide Comprising Its Target Site In Human Nfkb | |
| gi|1477646 | plectin [Homo sapiens] |
| gi|4507953 | 14-3-3 protein zeta/delta [Homo sapiens] |
| gi|2138314 | lysyl hydroxylase isoform 2 [Homo sapiens] |
| gi|283807248 | Chain A, Crystal Structure Analysis Of W21a Mutant Of Human Gsta1-1 In Complex With |
| S-Hexylglutathione | |
| gi|6005942 | transitional endoplasmic reticulum ATPase [Homo sapiens] |
| gi|1065322 | Chain A, A Surface Mutant (G82r) Of A Human Alpha-Glutathione S- Transferase Shows Decreased |
| gi|1065322 | Thermal Stability And A New Mode Of Molecular Association In The Crystal |
| gi|799177 | 100 kDa coactivator [Homo sapiens] |
| gi|4505753 | phosphoglycerate mutase 1 [Homo sapiens] |
| gi|5107666 | Chain A, Structure Of Importin Beta Bound To The Ibb Domain Of Importin Alpha |
| gi|158937236 | puromycin-sensitive aminopeptidase [Homo sapiens] |
| gi|5825506 | fatty acid synthase/estrogen receptor fusion protein [Homo sapiens] |
| gi|5257007 | beta-cop homolog [Homo sapiens] |
| gi|896473 | iron-responsive regulatory protein/iron regulatory protein 1 [Homo sapiens] |
| gi|34707 | Manganese superoxide dismutase [Homo sapiens] |
| gi|4506715 | 40S ribosomal protein S28 [Homo sapiens] |
| gi|3212355 | Chain A, P11 (S100a10), Ligand Of Annexin Ii |
| gi|1065361 | Chain A, Human Adp-Ribosylation Factor 1 Complexed With Gdp, Full Length Non-Myristoylated |
| gi|159162145 | Chain A, Rotamer Strain As A Determinant Of Protein Structural Specificity |
| gi|51247357 | Chain A, Crystal Structure Of A Multiple Hydrophobic Core Mutant Of Ubiquitin |
| gi|215273984 | RecName: Full=Putative inactive carboxylesterase 4; AltName: Full=Inactive carboxylesterase 1 |
| gi|215273984 | pseudogene 1; AltName: Full=Placental carboxylesterase 3; Short=PCE-3; Flags: Precursor |
| gi|4502013 | adenylate kinase 2, mitochondrial isoform a [Homo sapiens] |
| gi|5803013 | endoplasmic reticulum resident protein 29 isoform 1 precursor [Homo sapiens] |
| gi|229532 | ubiquitin |
| gi|31615803 | Chain A, Synthetic Ubiquitin With Fluoro-Leu At 50 And 67 |
| gi|2627129 | polyubiquitin [Homo sapiens] |
| gi|6755368 | 40S ribosomal protein S18 [Mus musculus] |
| gi|313103963 | Chain D, Structure And Control Of The Actin Regulatory Wave Complex |
| gi|6114601 | stromal antigen 3, (STAG3) [Homo sapiens] |
| gi|4588526 | nuclear chloride channel [Homo sapiens] |
| Proteins identified in(-) and (+) cells | |
| gi|32189394 | ATP synthase subunit beta, mitochondrial precursor [Homo sapiens] |
| gi|31645 | glyceraldehyde-3-phosphate dehydrogenase [Homo sapiens] |
| gi|1710248 | protein disulfide isomerase-related protein 5 [Homo sapiens] |
| gi|215273984 | RecName: Full=Putative inactive carboxylesterase 4; AltName: Full=Inactive carboxylesterase 1 |
| gi|215273984 | pseudogene 1; AltName: Full=Placental carboxylesterase 3; Short=PCE-3; Flags: Precursor |
| gi|4758304 | protein disulfide-isomerase A4 precursor [Homo sapiens] |
| gi|4505591 | peroxiredoxin-1 [Homo sapiens] |
| gi|303618 | phospholipase C-alpha [Homo sapiens] |
| gi|5031857 | L-lactate dehydrogenase A chain isoform 1 [Homo sapiens] |
| gi|5802974 | thioredoxin-dependent peroxide reductase, mitochondrial isoform a precursor [Homo sapiens] |
| gi|306891 | 90kDa heat shock protein [Homo sapiens] |
