Figure 4
From: A feedback framework for protein inference with peptides identified from tandem mass spectra
Protein inference results of Mix 2. This figure shows the protein inference results of Mix 2. The protein identification threshold is set as 0. 95. They demonstrate the same patterns as the results of Mix 1. Based on the protein inference results of the two datasets, IM shows the potential of better performance than ProteinProphet in terms of the number of true and false positive proteins.