Figure 5
From: A feedback framework for protein inference with peptides identified from tandem mass spectra
Protein inference results of Mix 1 by varying protein inference threshold. This figure shows the protein inference results of Mix 1 when the protein inference threshold is varied. The threshold for selecting high-confidence peptides is set as 0. 95. It shows that the iterative method consistently outputs more true positive proteins and less false positive proteins than ProteinProphet.