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Table 3 Oligonucleotide primers for real-time RT PCR

From: Wounding, insect chewing and phloem sap feeding differentially alter the leaf proteome of potato, Solanum tuberosum L.

Spot

Protein

Gene

Accession No. a

Forward primer (5’–3’)

Reverse primer (5’–3’)

Size (bp)

104

ATPase β subunit

atpB

AY300043

ATGAGAGTTGGTTTGACTGC

CGAATTGTTTCTGCTAGACC

629

304

Rubisco (large subunit)

rbcL

M76402

GAACGTGAACTCACAACCAT

GACATACGTAACGCTTTTGC

351

172

Rubisco activase

rca

SGN-U243405

AATACACCGTCAACAACCAG

CACCAATGTTTTCAATTCCA

382

349

l-Ascorbate peroxidase (chloroplastic)

apx

SGN-U247328 + SGN-U258329

ATGAGGATCGCTTTCATAGAC

ATTTTCTGGTCTGCTGATCTC

311

444

PsaD (PSI subunit II)

psaD

STU556864

TGGAAACAATCCCTCCTATC

ACAAATTGGGTCCTTCTCTC

310

451

PsaE-B (PSI subunit IV-B)

psaE-B

SGN-U245041

CCTAATGTCACCTCTAACTCTG

TAAAACATGGAAAGCACAGG

458

---

Proteinase inhibitor II

pinII

L37519

AATCTTGGGTTTGGGATATG

TATGTGGATCGCAATTTAGG

178

---

PR-1 protein P4

p4

AJ250136

GCACAAAATTATGCCAACTC

AGTTGCATGAAATGAACCAC

271

---

Elongation factor 1-a

ef1-α

AB061263

ATTGGAAACGGATATGCTCCA

TCCTTACCTGAACGCCTGTCA

101

  1. aAccession numbers from the NCBI GenBank Database ( http://www.ncbi.nlm.nih.gov) or the Solanaceae Genomics Network Database ('SGN' sequences; http://www.sgn.cornell.edu).