Table 2 The numbers of FIMO hits of mouse TFs from JASPAR database with top 12 O hc , ranked by the p-values of the odds ratios (PRDM9's results are also shown in this table)
From: Epigenetic functions enriched in transcription factors binding to mouse recombination hotspots
HG Genes | HM | HN | CM | CN | O hc | p-value |
|---|---|---|---|---|---|---|
KLF4 | 886 | 8988 | 643.15 | 9230.85 | 1.415 | < 0.0001 |
ZFX | 437 | 9437 | 329 | 9545 | 1.343 | < 0.0001 |
CTCF | 1002 | 8872 | 769.9 | 9104.1 | 1.336 | < 0.0001 |
PRDM9 | 1405 | 8469 | 1120.35 | 8753.65 | 1.30 | < 0.0001 |
RXRA | 1015 | 8859 | 819.55 | 9054.45 | 1.266 | < 0.0001 |
ESRRB | 792 | 9082 | 663.4 | 9210.6 | 1.211 | 0.0002 |
GABPA | 110 | 9764 | 67.05 | 9806.95 | 1.648 | 0.0006 |
MYCN | 197 | 9677 | 137.45 | 9736.55 | 1.440 | 0.0006 |
SPZ1 | 322 | 9552 | 249.55 | 9624.45 | 1.300 | 0.0013 |
MYC | 129 | 9745 | 91 | 9783 | 1.423 | 0.0061 |
PAX5 | 194 | 9680 | 151.35 | 9722.65 | 1.287 | 0.0113 |
EGR1 | 85 | 9789 | 61.55 | 9812.45 | 1.384 | 0.0343 |
T | 189 | 9685 | 155.95 | 9718.05 | 1.216 | 0.0411 |