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Table 1 local search.

From: Rapid sampling of local minima in protein energy surface and effective reduction through a multi-objective filter

  Native PDB id Size fold % α % β Lowest Energy (kcal/mol) Lowest lRMSD (Å)
       T = 0 T 0 T 1 T 2 T = 0 T 0 T 1 T 2
1 1dtdB 61 α/β 15 46 -128.2 -132.1 -131.6 -127.9 6.9 6.6 6.9 7.0
2 1isuA 62 α/β 15 19 -127.8 -130.3 -130.7 -130.2 6.3 6.0 6.4 6.0
3 1c8cA 64 α/β 22 48 -133.5 -134.8 -130.8 -129.6 6.5 6.6 7.4 7.3
4 1sap 66 α/β 30 44 -132.8 -132.3 -133.6 -127.3 6.5 6.0 6.8 6.9
5 1hz6A 67 α/β 31 42 -143.5 -144.7 -142.1 -138.9 5.7 5.9 6.0 6.0
6 1wapA 68 β 0 62 -118.4 -127.2 -133.9 -127.9 7.4 7.6 7.4 7.5
7 1fwp 69 α/β 30 26 -152.8 -152.0 -143.5 -143.2 6.3 6.7 6.5 6.1
8 1ail 70 α 84 0 -170.6 -171.0 -167.3 -168.4 3.2 3.2 3.4 3.3
9 1aoy 78 α/β 41 10 -183.9 -181.2 -180.8 -184.1 5.7 6.4 6.0 6.4
10 1cc5 83 α 47 4 -170.9 -171.5 -179.1 -173.8 5.8 5.7 5.8 5.8
11 2ezk 93 α 68 0 -217.3 -218.6 -224.4 -216.0 4.3 4.6 4.2 4.4
12 1hhp 99 β 7 48 -168.7 -175.4 -179.0 -175.9 10.4 10.4 10.0 10.5
13 2hg6 106 α/β 34 21 -233.6 -236.8 -239.5 -235.1 8.8 9.0 8.8 9.2
14 3gwl 106 α 70 0 -264.6 -270.4 -273.9 -267.3 4.9 4.9 4.4 5.2
15 2h5nD 123 α 71 2 -307.8 -313.0 -316.5 -313.2 7.5 7.9 7.4 8.1
  1. Columns 2-4 show the native PDB id, size and fold topology for each of the 15 target protein systems. Columns 5 and 6 break the fold topology down as the percentage of amino acids which are part of -helices and (3-sheets. Columns 7-10 report the minimum energy achieved for each temperature T of the minimization component of the BH framework. Columns 11-14 then report the corresponding lowest lRMSD to the native structure achieved for each T .