Table 4 Number and average size of generated clusters from different methods on Gavin_2006 network and Krogan_2006 network.
From: Integrating domain similarity to improve protein complexes identification in TAP-MS data
| Â | MCL | MCODE | CFinder | RRW | COACH | CODEC-w0 | CODEC-w1 | BGCA+BP |
|---|---|---|---|---|---|---|---|---|
Gavin_2006 | Â | Â | Â | Â | Â | Â | Â | Â |
No. of clusters | 782 | 100 | 65 | 474 | 612 | 1082 | 1005 | 542 |
Ave. size | 5.4 | 12.1 | 16.4 | 2.1 | 78.1 | 17.3 | 13.8 | 5.0 |
Krogan_2006 | Â | Â | Â | Â | Â | Â | Â | Â |
No. of clusters | 1548 | 73 | 73 | 690 | 1927 | 8348 | 2973 | 511 |
Ave. size | 5.5 | 25.2 | 15.1 | 2.1 | 181.8 | 16.1 | 16.2 | 5.3 |