From: Ranking and compacting binding segments of protein families using aligned pattern clusters
 | APC (as regular expressions) | m | n | Quality | Coverage | Standard Residual | Binding Site |
---|---|---|---|---|---|---|---|
1 | WGEDTLMEYLENPKKYIPGTKM IFAGIKKK | 8 | 30 | 0.57 | 81 | 5.92E+16 | Met62 |
2 | MGDVEKGKKIFVQ[KR]CAQCH TVEKGGKHKTGPNL | 19 | 33 | 0.43 | 119 | 5.04E+16 | His18 |
3 | QCH TVEKGGKHKTGPNLHGLFGRKTGQA | 7 | 28 | 0.41 | 46 | 8.32E+14 | His18 |
4 | TLYDYLLNPKKYIPGTKM[VA]FPGLKKPQ | 8 | 27 | 0.44 | 116 | 1.91E+14 | Met62 |
5 | GAGHK[QVT]GPNL[NH]GLFGRQSGTT | 13 | 21 | 0.4 | 125 | 3.53E+10 | Â |
6 | GFSYTDANKNKGITWGE | 8 | 17 | 0.41 | 66 | 6.33E+08 | Â |
7 | GEKIFKTKCAQCH TV | 3 | 15 | 0.57 | 24 | 6.45E+07 | His18 |
8 | MGDVEKGKKIFVQKC | 7 | 15 | 0.4 | 53 | 5.04E+07 | Â |
9 | GPNLHGLFGRKTGQA | 4 | 15 | 0.43 | 46 | 4.37E+07 | Â |
10 | ERADLIAYLK[KE]ATNE | 9 | 15 | 0.4 | 91 | 3.53E+07 | Â |
11 | HGLFGRKTGQAPGF | 9 | 14 | 0.46 | 70 | 2.10E+07 | Â |
12 | IPGTKM AFGGLKK | 4 | 13 | 0.42 | 136 | 9.06E+06 | Met62 |
13 | AANKNKGITWGE | 4 | 12 | 0.5 | 54 | 1.60E+06 | Â |
14 | LHGLFGR[QK]SGTT | 6 | 12 | 0.42 | 88 | 1.07E+06 | Â |
15 | AGYSYSAANKN | 5 | 11 | 0.43 | 30 | 1.40E+05 | Â |
16 | TLYDYLLNP | 2 | 9 | 0.56 | 29 | 2.69E+04 | Â |
17 | GQAPGFSY | 2 | 8 | 0.5 | 27 | 5.57E+03 | Â |
18 | TKM VFAG | 2 | 7 | 0.57 | 52 | 3.38E+03 | Met62 |
19 | GGKHKTG | 2 | 7 | 0.43 | 64 | 2.94E+03 | Â |
20 | EKGKKIF | 2 | 7 | 0.43 | 62 | 2.85E+03 | Â |
21 | FAGLKKP | 3 | 7 | 0.48 | 57 | 2.62E+03 | Â |
22 | WGGGKIY | 2 | 7 | 0.71 | 27 | 2.48E+03 | Â |
23 | FAGIKKK | 2 | 7 | 0.43 | 51 | 2.34E+03 | Â |
24 | YLKKAT | 1 | 6 | 1 | 29 | 1.19E+03 | Â |
25 | WGEDTL | 1 | 6 | 1 | 25 | 1.02E+03 | Â |
26 | NCAACH | 2 | 6 | 0.83 | 30 | 8.68E+02 | His18 |
27 | KGAGHK | 2 | 6 | 0.83 | 26 | 7.52E+02 | Â |
28 | KGITW | 1 | 5 | 1 | 49 | 4.46E+02 | Â |
29 | GFSYT | 1 | 5 | 1 | 42 | 3.83E+02 | Â |
30 | FVQKC | 1 | 5 | 1 | 39 | 3.55E+02 | Â |
31 | DANKN | 1 | 5 | 1 | 34 | 3.10E+02 | Â |
32 | GYSYT | 1 | 5 | 1 | 28 | 2.55E+02 | Â |
33 | AM PAF | 1 | 5 | 1 | 24 | 2.19E+02 | Met62 |
34 | CH AGG | 1 | 5 | 1 | 22 | 2.00E+02 | His18 |
35 | FKTRC | 1 | 5 | 1 | 20 | 1.82E+02 | Â |
36 | LFEYL | 1 | 5 | 1 | 20 | 1.82E+02 | Â |