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Table 6 Effect of suberin on Streptomyces scabiei gene expression

From: Comparative secretome analysis of Streptomyces scabiei during growth in the presence or absence of potato suberin

Gene assignation

Protein assignation

Putative function

Relative gene expressiona

   

Day 2

Day 3

Day 4

Day 5

SCAB_3891

C9YSS1

α-galactosidase

7.3 ± 3.5b

6.3 ± 3.2b

3.4 ± 1.0b

3.4 ± 1.1b

SCAB_6001

C9YVP7

Feruloyl esterase

29.6 ± 14.8b

74.0 ± 24.0b

78.0 ± 23.6b

159.3 ± 14.3b

SCAB_51091

C9YTK3

Esterase-lipase

1.8 ± 0.6b

1.9 ± 0.5b

0.8 ± 0.1

1.5 ± 0.4

SCAB_57301

C9Z2P6

3-oxo-5.6-dehydrosuberyl-CoA semialdehyde dehydrogenase

1.7 ± 0.6b

2.3 ± 1.2

1.2 ± 0.6

1.0 ± 0.3

SCAB_70541

C9YYE5

Lipolytic enzyme

3.6 ± 1.3b

9.4 ± 4.1b

6.5 ± 0.9b

12.9 ± 1.3b

SCAB_74351

C9Z5Z2

Glycerophosphoryl diester phosphodiesterase

2.0 ± 0.5b

3.6 ± 0.9b

1.2 ± 0.5

1.2 ± 0.1

SCAB_78851

C9ZCR0

Sphingolipid ceramide N-deacylase

1.2 ± 0.4

4.6 ± 1.7b

1.8 ± 0.2b

1.3 ± 0.3

SCAB_79261

C9ZE96

Feruloyl esterase

298.3 ± 184.3b

298.6 ± 81.0b

301.0 ± 73.6b

342.0 ± 46.3b

  1. aData are the mean of four replicates; bGene expression was significantly different between growth conditions.