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Table 1 The expected pH ranges per fraction were calculated according to the IPG strip supplier data and the OFFGEL well dimensions and compared with experimental pI obtained for plasma and secretome samples.

From: Peptides OFFGEL electrophoresis: a suitable pre-analytical step for complex eukaryotic samples fractionation compatible with quantitative iTRAQ labeling

   

Plasma

Secretome

Fraction

Expected pH range

Peptide pI Average

s.d.

Peptide pI Average

s.d

1

3.35

3.61

4.11

0.40

4.24

0.92

2

3.61

3.88

4.17

0.56

4.11

0.31

3

3.88

4.14

4.29

0.22

4.24

0.26

4

4.14

4.40

4.53

0.32

4.40

0.19

5

4.40

4.66

4.67

0.42

4.56

0.33

6

4.66

4.93

4.77

0.45

4.90

0.84

7

4.93

5.19

5.25

0.59

5.55

0.54

8

5.19

5.45

5.61

0.36

5.33

0.65

9

5.45

5.71

5.61

0.39

5.50

0.41

10

5.71

5.98

5.71

0.67

5.66

0.39

11

5.98

6.24

5.81

0.70

5.88

0.36

12

6.24

6.50

5.99

0.70

5.88

0.42

13

6.50

6.76

6.10

0.75

6.11

0.61

14

6.76

7.03

6.20

0.85

6.22

0.72

15

7.03

7.29

6.48

0.80

6.78

1.24

16

7.29

7.55

6.63

0.78

6.73

0.87

17

7.55

7.81

6.89

0.87

6.79

0.88

18

7.81

8.08

7.75

1.13

6.88

0.95

19

8.08

8.34

8.20

1.26

7.64

1.81

20

8.34

8.60

8.36

1.03

7.78

1.70

21

8.60

8.86

8.33

1.05

8.33

1.20

22

8.86

9.13

8.31

1.23

8.42

0.97

23

9.13

9.39

8.49

1.06

8.77

1.04

24

9.39

9.65

8.48

1.42

9.22

1.13

  1. (s.d. = standard deviation)