Identification of protein functions using a machine-learning approach based on sequence-derived properties

Table 7 Detailed results of SVM with feature selection (SVM_CFS)

Protein class	Sensitivity	Specificity	F-measure	MCC
Transport	87.58	97.83	0.92	0.87
Transcription	98.31	95.01	0.97	0.93
Translation	68.75	100	0.82	0.82
Gluconate utilisation	85.71	100	0.92	0.92
Amino acid biosynthesis	79.58	100	0.89	0.84
Fatty acid metabolism	56.79	99.73	0.72	0.71
Acetylcholine receptor inhibitor	100	100	1.00	1.00
G-protein coupled receptor	99.24	97.54	0.98	0.96
Guanine nucleotide-releasing factor	88.57	99.78	0.93	0.92
Fibre protein	83.33	100	0.91	0.91
Transmembrane	97.76	97.89	0.97	0.95

ISSN: 1477-5956