|  |  |  | theoretical | experimental |  |  |  | ||
---|---|---|---|---|---|---|---|---|---|---|
spot# | orf | protein name | %cov | pI | MW (kDa) | pI | MW (kDa) | fold* | t-test | cluster t |
Up regulated proteins (separated by pH range 3-10 in the first dimension) | Â | Â | Â | Â | Â | Â | Â | Â | Â | |
Two component systems | Â | Â | Â | Â | Â | Â | Â | Â | Â | |
954 | AP05090011 | Multi-sensor signal transduction histidine kinase | 5.69 | 5.23 | 135.61 | 6.19 | 161.10 | 2.1 | 0.048 | 13 |
1011 | AP07350018 | Hybrid sensor and regulator | 3.42 | 5.16 | 157.04 | 4.92 | 150.14 | 1.37 | 0.047 | 8 |
1707 | AP06710002 | Multi-sensor signal transduction histidine kinase | 7.52 | 5.25 | 116.20 | 5.02 | 81.51 | 1.78 | 0.0043 | 22 |
Chaperones | Â | Â | Â | Â | Â | Â | Â | Â | Â | |
912 | AP07830020 | Molecular chaperone DnaK | 7.38 | 4.78 | 68.30 | 3.52 | 168.46 | 1.91 | 0.0078 | 23 |
Stress related proteins | Â | Â | Â | Â | Â | Â | Â | Â | Â | |
571 | AP07830017 | Polyphosphate kinase | 4.16 | 5.47 | 82.79 | 4.4 | 219.16 | 1.6 | 0.042 | 23 |
1078 | AP07620006 | ABC transporter-like protein | 5.62 | 5.5 | 64.24 | 3.98 | 142.91 | 1.43 | 0.0079 | 8 |
1366 | AP05380002 | DEAD/DEAH box helicase domain protein (membrane-helicase) | 2.67 | 6.09 | 239.75 | 4.14 | 111.67 | 1.88 | 0.011 | 23 |
3925 | AP05940003 | Transcriptional regulator, LysR family | 9.86 | 7.11 | 31.25 | 8.37 | 6.19 | 2.66 | 0.012 | 23 |
DNA repairing system | Â | Â | Â | Â | Â | Â | Â | Â | Â | |
684 | AP04930005 | N-6 DNA methylase | 8.7 | 5.24 | 59.46 | 3.32 | 206.66 | 2.23 | 0.039 | 23 |
1399p | AP05780004 | Type I site-specific restriction-modification with related helicase system | 10.55 | 5.97 | 127.07 | 7.33 | 107.30 | 1.59 | 0.022 | 8 |
Translation machinery | Â | Â | Â | Â | Â | Â | Â | Â | Â | |
1634 | AP07840003 | 30S ribosomal protein S18 | 28.17 | 10.58 | 8.36 | 4.95 | 87.88 | 1.62 | 0.037 | 8 |
Channeling system | Â | Â | Â | Â | Â | Â | Â | Â | Â | |
1499 | AP05960003 | Preprotein translocase SecA subunit | 6.67 | 5.14 | 105.74 | 5.8 | 98.14 | 1.88 | 0.023 | 22 |
Hypothetical proteins | Â | Â | Â | Â | Â | Â | Â | Â | Â | |
564 | AP07810017 | Hypothetical protein | 12.75 | 7.9 | 211.37 | 4.3 | 221.75 | 1.6 | 0.048 | 22 |
Proteins containing conserved motifs | Â | Â | Â | Â | Â | Â | Â | Â | Â | |
1242 | AP06700002 | WD-40 repeat protein-peptidase C14, caspase catalytic subunit p20 | 4.37 | 5.26 | 183.10 | 4.13 | 122.68 | 1.68 | 0.019 | 23 |
1258 | AP06390003 | Pentapeptide repeat- transcriptional regulator, XRE family | 10.82 | 6.2 | 160.34 | 5.43 | 121.53 | 1.64 | 0.0057 | 8 |
Others | Â | Â | Â | Â | Â | Â | Â | Â | Â | Â |
1627 | AP04100001 | Glucose-inhibited division protein A | 5.49 | 6.21 | 71.63 | 4.83 | 88.29 | 1.79 | 0.039 | 8 |
Up regulated proteins (separated by pH range 4-7 in the first dimension) | Â | Â | Â | Â | Â | Â | Â | Â | Â | |
Two component systems | Â | Â | Â | Â | Â | Â | Â | Â | Â | |
1513p | AP06990006 | Phytochrome-like protein | 7.12 | 5.5 | 104.01 | 5.78 | 101.22 | 1.72 | 0.0076 | 23 |
1954 | AP07670017 | Two-component sensor histidine kinase | 4.35 | 4.88 | 124.16 | 5.07 | 63.09 | 1.85 | 0.051 | ud |
Stress related proteins | Â | Â | Â | Â | Â | Â | Â | Â | Â | |
502 | AP07700024 | Putative transcriptional acitvator, Baf | 15.77 | 6.59 | 28.74 | 5.73 | 232.21 | 2.37 | 0.04 | 21 |
701 | AP06620002 | Glycosyl transferase domain containing protein | 7.29 | 5.92 | 134.25 | 5.03 | 205.94 | 1.69 | 0.025 | 23 |
781 | AP08030034 | Aldo/keto reductase | 16.02 | 6.22 | 38.85 | 5.08 | 194.92 | 1.88 | 0.046 | 23 |
879 | AP06740013 | Ferredoxin-glutamate synthase | 2.04 | 5.6 | 169.95 | 4.66 | 184.48 | 2.27 | 0.047 | 23 |
2082 | AP04600003 | S-adenosyl-L-homocysteine hydrolase | 14.96 | 5.63 | 48.77 | 5.27 | 54.85 | 2.18 | 0.023 | 23 |
DNA damage/DNA reparing system | Â | Â | Â | Â | Â | Â | Â | Â | Â | |
163 | AP03680003 | Putative RNA-directed DNA polymerase (Reverse transcriptase):HNH endonuclease | 8.13 | 9.73 | 56.22 | 5.1 | 293.02 | 3.89 | 0.027 | 6 |
Proteins containing conserved motif | Â | Â | Â | Â | Â | Â | Â | Â | Â | |
1852 | AP05550005 | TPR repeat-prenyl transferase | 12.7 | 5.34 | 41.12 | 4.75 | 72.40 | 1.89 | 0.0071 | 23 |
Others | Â | Â | Â | Â | Â | Â | Â | Â | Â | |
452 | AP07910008 | Adenylate cyclase | 13.72 | 5.59 | 51.10 | 5.42 | 237.50 | 5.53 | 0.032 | 21 |