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Table 1 Selected plasma membrane proteins identified from rat dorsal root ganglia

From: Enrichment and proteomic analysis of plasma membrane from rat dorsal root ganglions

IDa Proteins name Scores/peptides MWb pIc TMDd GRAVYe
Ion channels
IPI00211012 Voltage-gated potassium channel subunit beta-2 38/1 41280 9.09 0 -0.2692
IPI00198327 Voltage-dependent anion-selective channel protein 2 223/5 32353 7.17 0 -0.2210
IPI00190644 Potassium voltage-gated channel subfamily a member 1 96/3 56800 4.98 4 -0.0668
IPI00480697 Isoform 2 of transient receptor potential cation channel subfamily vmember 39/2 77382 6.27 6 0.0462
IPI00208249 chloride intracellular channel protein 4 172/5 28843 5.72 0 -0.4003
IPI00421874 Voltage-dependent anion-selective channel protein 1 580/11 32513 8.60 0 -0.4229
IPI00326646 Sodium channel 98/4 197410 6.30 16 0.1930
IPI00556929 Isoform 1 of voltage-dependent anion-selective channel protein 3 183/4 31292 8.90 0 -0.2964
IPI00327202 Aquaporin-1 77/2 29066 7.44 6 0.4881
IPI00767085 Similar to potassium channel tetramerisation domain containing protein12. 60/2 47077 9.35 0 -0.5641
Transporters
IPI00192160 Plasmolipin 218/4 19934 9.45 4 0.9538
IPI00188119 Isoform long of potassium-transporting ATPase alpha chain 2 264/5 115656 6.07 8 0.0337
IPI00194875 Isoform wb of plasma membrane calcium-transporting ATPase 2 76/2 137922 5.65 8 -0.1662
IPI00205693 Sodium/potassium-transporting ATPase alpha-2 chain precursor 1529/32 113480 5.33 8 -0.0070
IPI00208061 Sodium/potassium-transporting ATPase subunit beta-3 199/4 32151 8.03 1 -0.2605
IPI00213585 Isoform short of calcium-transporting ATPase type 2c member 1 100/3 101519 6.18 8 0.1639
IPI00231267 Isoform a of plasma membrane calcium-transporting ATPase 1 131/3 139601 5.79 7 -0.1068
IPI00231451 Sodium/potassium-transporting ATPase alpha-3 chain 1389/28 113480 5.21 8 -0.0066
IPI00231462 Isoform short of potassium-transporting ATPase alpha chain 2 169/6 115656 5.79 8 0.1807
IPI00325847 Gpi-anchored ceruloplasmin 41/2 124469 5.35 0 -0.4821
IPI00326305 Sodium/potassium-transporting ATPase alpha-1 chain precursor 1913/37 114316 5.25 10 0.0020
IPI00339124 Sodium/potassium-transporting ATPase subunit beta-1 258/6 35762 8.81 1 -0.5241
IPI00390795 ATPase, Na+/K+transporting, alpha 4 polypeptide 398/8 115260 5.49 10 0.0337
IPI00476086 Atpase, h+ transporting, v0 subunit d isoform 1 290/9 40731 4.83 0 -0.0925
IPI00558343 Na+, K+-ATPase alpha-1 subunit (fragment) 93/2 27339 6.76 0 -0.1592
Receptors
IPI00202168 Isoform 2 of sigma 1-type opioid receptor 100/3 21652 5.38 1 0.2942
IPI00203747 Low-density lipoprotein receptor precursor 95/3 100037 4.76 1 -0.4006
IPI00363550 Similar to transferrin receptor 112/5 86221 5.73 1 -0.2528
IPI00365669 Cation-dependent mannose-6-phosphate receptor precursor 52/2 31589 5.15 1 -0.1604
IPI00654429 Taste receptor type 2 member 110. 37/1 38552 10.0 0 0.8825
Cell-cell communication proteins
IPI00476991 Neural cell adhesion molecule 1, 140 kda isoform precursor 273/8 95411 4.80 1 -0.4328
IPI00206054 Contactin-1 precursor 156/4 114278 5.71 0 -0.3094
IPI00208699 Contactin-associated protein 1 precursor 68/3 157765 6.49 1 -0.3064
  1. aIPI database accession number. bCalculated molecular weight. cValue predicted by TMHMM. dGravy Value calculated using ProtParam algorithm. eCalculated isoelectric point