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Table 3 Identified proteins in HEAN and CHAR steers by 2D-gel and MS analysis

From: Proteome differences associated with fat accumulation in bovine subcutaneous adipose tissues

Spota

Accessionb

Protein name

Scorec

Cd

Ne

MW(kDa/pI)

sequencef

Average Fold changeg

C7

114053019

alpha-1-B glycoprotein [Bos taurus]

255/56

17

7

54.1/5.29

R. FPLGPVTSTTR.G

R.LEGEDQFLEVAEAPEATQATFPVHR.A

R.VLSPAGPEAQFELR.G

R.ALWTGALTPGR.D

R.CEAEVPDVSFLLLR.A

R.SLLSELSDPVELR.V

-3.7

C12

2501351

serotransferrin precursor [Bos taurus]

176/55

7

3

79.9/6.75

K.SVDDYQECYLAMVPSHAVVAR.T

K.GEADAMSLDGGYLYIAGK.C

K.FDEFFSAGCAPGSPR.N

-2.8

C13

3024627

Alpha-soluble NSF attachment protein [Bos taurus]

289/54

32

8

33.6/5.39

K.NSQSFFSGLFGGSSK.I

K.HDAATCFVDAGNAFK.K

K.ADPQEAINCLMR.A

K.VAGYAAQLEQYQK.A

K.YEELFPAFSDSR.E

K.LLEAHEEQNVDSYTEAVK.E

R.LDQWLTTMLLR.I

+2.7

C27

119924886

purine nucleoside phosphorylase [Bos taurus]

423/56

39

10

32.4/6.25

M.ENGFTYEDYQDTAK.W

R.LTQAQTFDYSEIPNFPKSTVPGHAGR

R.DHINLPGFSGENPLR.G

R.FPAMSDAYDR.D

R.NLGADAVGMSTVPEVIVAR.H

R.VFGFSLITNK.V

K.VIMDYESQGK.A

K.ADHKEVLEAGK.Q

-1.6

C36

162287374

polymerase I and transcript release factor isoform 2 [Bos taurus]

311/57

20

9

43.4/5.49

K.SDQVNGVLVLSLLDK.I

K.IIGAVDQIQLTQAQLEER.Q

R.QAEMEGAVQSIQGELSK.L

K.KLEVNEAELLR.R

K.LEVNEAELLR.R

K.ATEMVEVGAEEEEGGAER.G

+1.8

C42

74

annexin I [Bos taurus]

600/57

45

20

39.2/6.44

K.QAWFIENEEQEYIK.T

K.GGPGSAVSPYPTFNPSSDVEALHK.A

K.GVDEATIIEILTK.R

K.KALLGHLEEVVLALLK.T

K.ALLGHLEEVVLALLK.T

K.TPAQFDAEELR.A

K.GLGTDEDTLNEILASR.T

R.SEELAVNDDLADSDAR.A

K.GTDVNVFTTILTTR.S

K.VLDLELK.G

K.CATSQPMFFAEK.L

K.LYGISLCQAILDETK.G

+1.7

H21

164420731

Transaldolase 1 [Bos taurus]

159/56

10

3

37.8/7.03

K.LGGSQEEQITNAIDK.L

K.LFVLFGAEILK.K

K.SYEPQEDPGVK.S

+1.7

H29

27807289

78365297

Annexin [Bos taurus]

glycerol-3-phosphate dehydrogenase 1 (soluble) [Bos taurus]

494/56

370/56

28

29

11

10

38.8/6.92

38.2/6.42

R.DALNIETAIK.T

K.GVDEVTIVNILTNR.S

K.TPAQYDASELK.A

R.TNQELQEINR.V

K.DIVSDTSGDFR.K

R.AEDGSVIDYELIDQDAR.D

K.SYSPYDMLESIK.K

K.SLYYYIQQDTK.G

K.VCIVGSGNWGSAIAK.I

R.VTMWVFEEDIGGR.K

R.KLTEIINTQHENVK.Y

K.LTEIINTQHENVK.Y

K.ADTIGVSLIK.G

K.LISEVIGER.L

R.LGIPMSVLMGANIANEVADEK.F

R.LGLMEMIAFAK.L

K.FPLFTAVYK.V

+1.5

H30

194680257

glucose-6-phosphate dehydrogenase [Bos taurus]

270/56

16

7

62.9/6.9

R.DGLLPEDTYIVGYAR.S

R.NSYVAGQYDDTASYK.R

R.DLQSSNQLSNHIASLFHEDQIYR.I

K.KPGMFFNPEESELDLTYGNR.Y

K.LPDAYER.L

R.GPVEADELMK.R

-1.5

H32

62751863

brain creatine kinase [Bos taurus]

784/56

46

27

42.9/5.47

R.FPAEDEFPDLSGHNNHMAK.V

K.VLTPELYAELR.A

R.GFCLPPHCSR.G

K.LAVEALSSLDGDLAGR.Y

K.SMTEAEQQQLIDDHFLFDKPVSPLLLASGMAR

K.PVSPLLLASGMAR.D

K.TFLVWINEEDHLR.V

R.FCNGLTQIETLFK.S

K.RGTGGVDTAAVGGVFDVSNADR.L

R.LGFSEVELVQMVVDGVK.L

K.LLIEMEQR.L

R.LEQGQAIDDLMPAQK.-

+1.5

H41

221325670

115496400

malic enzyme 1, NADP(+)-dependent, cytosolic [Bos taurus]

dihydropyrimidinase-like 2 [Bos taurus]

618/56

356/56

26

16

16

6

63.9/5.86

62.6/5.95

R.DLAFTLEER.Q

R.QQLNIHGLLPPSFISQDVQVLR.V

R.LNSDFDR.Y

R.YLLLMDLQDR.N

K.VLMSDIEK.F

R.GLFISIHDR.G

R.GHISSVLNAWPEDVIK.A

K.AIVVTDGER.I

K.IWLVDSK.G

K.AECTAEQCYK.L

R.AIFASGSPFDPVTLPSGK.S

K.IFLTTAEVIAQQVSDK.H

K.TATVYPEPPNK.E

K.QIGENLIVPGGVK.T

R.DIGAIAQVHAENGDIIAEEQQR.I

R.SITIANQTNCPLYITK.V

K.DNFTLIPEGTNGTEER.M

R.GSPLVVISQGK.I

R.GLYDGPVCEVSVTPK.T

+1.4

H44

13096153

Retinal Creatine Kinase [Bos taurus]

784/56

46

27

42.8/5.48

R.FPAEDEFPDLSGHNNHMAK.V

K.VLTPELYAELR.A

R.GFCLPPHCSR.G

K.LAVEALSSLDGDLAGR.Y

K.SMTEAEQQQLIDDHFLFDKPVSPLLLASGMAR.D

K.PVSPLLLASGMAR.D

K.TFLVWINEEDHLR.V

R.FCNGLTQIETLFK.S

K.RGTGGVDTAAVGGVFDVSNADR.L

R.LGFSEVELVQMVVDGVK.L

K.LLIEMEQR.L

R.LEQGQAIDDLMPAQK.-

+1.6

H47

75832090

isocitrate dehydrogenase 1 (NADP+), soluble

1022/56

55

36

47.1/6.13

K.IQGGSVVEMQGDEMTR.I

K.CATITPDEK.R

R.NILGGTVFR.E

R.LVSGWVKPIIIGR.H

R.ATDFVVPGPGK.V

K.VEISYTPSDGSPK.T

K.TVYLVHNFTESGGVAMGMYNQDK.S

K.SIEDFAHSSFQMALSK.N

R.FKDIFQEIYDK.Q

K.SEFEAQNIWYEHR.L

R.LIDDMVAQAMK.S

K.SEGGFIWACK.N

K.TVEAEAAHGTVTR.H

K.GQETSTNPIASIFAWTR.G

K.ALEEVCIETIEAGFMTK.D

K.DLAACIK.G

R.SDYLNTFEFMDK.L

K.LGENLQLK.L

+1.4

  1. aSpot number as given on the 2-D gel image. C spot from CHAR crossbred, H spot from HEAN crossbred
  2. bgi number from NCBI database of matched protein
  3. cMascot score/Mascot threshold score for each identified protein.
  4. dPercent sequence coverage (%)
  5. eNumber of matched peptides
  6. fThe sequence of matched peptides
  7. gThe expression level (in fold change) in High BF tissues compared to Low BF tissues