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Table 2 Cell surface proteins identified by trypsin-shaving

From: Localization of proteins in the cell wall of Mycobacterium avium subsp. paratuberculosis K10 by proteomic analysis

Genbank accession

Locus tag

gene name

Tuberculosis

H37Rv homologue

Functional classification

TMHs

pI

MW

Signal P

(Y/N)

Protein name

gi|41410034

MAP3936

 

Rv0440

0

 

4.60

56635.20

N

chaperonin GroEL

gi|41410241

MAP4143

Tuf

Rv0685

2

 

4.96

43765.28

N

elongation factor Tu

gi|41409122

MAP3024c

 

Rv2986c

2

 

12.48

22187.24

 

HupB

gi|41409749

MAP3651c

FadE3_2

Rv0215c

1

1

6.12

44045.71

N

FadE3_2

gi|41408095

MAP1997

acpP

Rv2244

1

 

3.77

12483.25

N

acyl carrier protein

gi|33327135

MAP3968

hbhA

Rv0475

3

 

9.84

21534.4

Y

heparin-binding hemagglutinin adhesin-like protein

gi|41407220

MAP1122

mihF

Rv1388

2

 

11.02

20817.01

Y

MIHF

gi|13375557

MAP1589c

ahpC

Rv2428

0

 

4.28

21566.2

Y

alkylhydroperoxidase C

gi|41407604

MAP1506

PPE26

Rv1789

6

 

4.18

38588.55

 

hypothetical protein MAP1506

gi|41409460

MAP3362c

sahH

Rv3248c

7

 

4.72

54428.58

N

S-adenosyl-L-homocysteine hydrolase

gi|41407617

MAP1519

PPE30

Rv1802

6

 

5.36

46020.98

Y

hypothetical protein MAP1519

gi|41408796

MAP2698c

DesA2

Rv1094

1

 

4.62

31465.61

N

DesA2

gi|41408096

MAP1998

KasA

Rv2245

1

1

4.84

43740.03

N

3-oxoacyl-(acyl carrier protein) synthase II

gi|41409938

MAP3840

dnaK

Rv0350

0

 

4.59

66830.67

Y

molecular chaperone DnaK

gi|41410362

MAP4264

groES

Rv3418c

0

 

4.34

10772.12

Y

co-chaperonin GroES

gi|41409791

MAP3693

fadA2

Rv0243

1

 

6.19

46844.14

N

acetyl-CoA acetyltransferase

gi|41407661

MAP1563c

 

Rv1855c

7

 

4.71

33359.95

N

hypothetical protein MAP1563c

gi|41406496

MAP0398c

 

Rv3676

9

 

10.24

24759.2

Y

PROBABLE TRANSCRIPTIONAL REGULATORY PROTEIN

gi|41406994

MAP0896

sucC

Rv0951

7

 

4.74

40925.62

Y

succinyl-CoA synthetase subunit beta

gi|41407064

MAP0966c

PPE61

Rv3532

6

 

4.15

41549.19

Y

hypothetical protein MAP0966c

gi|41409131

MAP3033c

SerA

Rv2996c

7

 

4.6

54501.08

N

SerA

gi|41409105

MAP3007

 

Rv2971

7

 

4.27

30009.58

N

hypothetical protein MAP3007

gi|41409286

MAP3188

FadE24

Rv3139

1

1

5.60

49533.15

N

FadE24

gi|41407088

MAP0990

eno

Rv1023

7

 

4.26

44929.34

Y

phosphopyruvate hydratase

gi|41407686

MAP1588c

AhpD

Rv2429

0

 

4.73

18839.91

N

AhpD

gi|41407262

MAP1164

gap

Rv1436

7

 

5.05

35923.74

Y

glyceraldehyde-3-phosphate dehydrogenase

gi|41407987

MAP1889c

Wag31

Rv2145c

3

 

4.38

28046.25

N

Wag31

gi|41410331

MAP4233

rpoA

Rv3457c

2

 

4.40

37699.63

N

DNA-directed RNA polymerase subunit alpha

gi|41410265

MAP4167

rpsC

Rv0707

2

 

10.71

29987.79

Y

rpsC

gi|41409159

MAP3061c

fixA

Rv3029c

7

 

4.37

28080.71

Y

PROBABLE ELECTRON TRANSFER FLAVOPROTEIN (BETA-SUBUNIT) FIXA

gi|41408326

MAP2228

fadE18

Rv1933c

1

 

6.18

38477.01

Y

hypothetical protein MAP2228

gi|41410331

MAP4233

rpoA

Rv3457c

2

 

4.40

37699.63

N

DNA-directed RNA polymerase subunit alpha

gi|41408552

MAP2453c

AtpH

Rv1307

7

 

4.65

59985.27

N

AtpH

gi|41409103

MAP3005c

 

Rv2969c

3

 

5.77

26829.39

Y

hypothetical protein MAP3005c

gi|41408378

MAP2280c

clpP2

Rv2460c

0

 

4.76

23507.67

Y

ATP-dependent Clp protease proteolytic subunit

gi|41409665

MAP3567

 

Rv0148

7

 

5.62

30180.38

N

hypothetical protein MAP3567

gi|41407606

MAP1508

esxP

Rv2347c

3

 

5.02

10977.18

Y

hypothetical protein MAP1508