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Table 1 Flavobacterium columnare potential pathogenesis-related proteins.

From: Proteomic analysis of the fish pathogen Flavobacterium columnare

ORF # Protein name Approach/SN a) Role category b)
ORF00560 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family 2-D LC Cell envelope (A)
ORF01244 3-deoxy-D-manno-octulosonate cytidylyltransferase 2-D LC Cell envelope (A)
ORF02664 Amidinotransferase family protein 2-D LC Cellular processes (E)
ORF01484 CHU large protein; gliding motility-related protein; putative adhesin AidA-related 2-D LC Cellular processes (C)
ORF01824 DTDP-4-dehydrorhamnose 3,5-epimerase 2-DE/120 Cell envelope (A)
ORF00198 Extracellular elastinolytic metalloproteinase 2-D LC Cellular processes (D)
ORF01481 Fibronectin type III domain protein 2-D LC Cellular processes (D)
ORF02336 GldL Both/152 Cellular processes (C)
ORF02335 GldM 2-D LC Cellular processes (C)
ORF02334 GldN 2-DE/151 Cellular processes (C)
ORF02678 Glucose-1-phosphate thymidylyltransferase 2-D LC Cell envelope (A)
ORF00396 Glycosyl transferase, group 1 2-D LC Cell envelope (A)
ORF02332 Glycosyltransferase, putative 2-D LC Cell envelope (A)
ORF00532 GTP-binding protein TypA/BipA 2-DE/36, 37 Cellular processes (F)
ORF01035 Hemagglutinin 2-D LC Cellular processes (E)
ORF02801 Lipid-A-disaccharide synthase 2-D LC Cell envelope (A)
ORF01136 LPS biosynthesis protein , RfbU family 2-D LC Cell envelope (A)
ORF02060 Mannosyltransferase 2-D LC Cell envelope (A)
ORF00475 Membrane protein, putative 2-D LC Cellular processes (E)
ORF01989 Monofunctional biosynthetic peptidoglycan transglycosylase 2-D LC Cell envelope (B)
ORF02568 PepSY-associated TM helix family 2-D LC Cellular processes (C)
ORF02672 Polysaccharide export outer membrane protein 2-D LC Cell envelope (A)
ORF01163 Tetraacyldisaccharide 4'-kinase 2-D LC Cell envelope (A)
ORF01370 UDP-3-0-acyl N-acetylglucosamine deacetylase 2-D LC Cell envelope (A)
ORF01367 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase 2-D LC Cell envelope (A)
ORF02676 UDP-glucose 6-dehydrogenase Both/169 Cell envelope (A)
ORF02536 UDP-N-acetylglucosamine 2-epimerase 2-D LC Cell envelope (A)
ORF00211 Universal stress protein family protein 2-DE/10 Cellular processes (F)
  1. a) SN indicates spot number marked on the 2-DE image (Figure 1).
  2. b) A, Biosynthesis and degradation of surface polysaccharides and lipopolysaccharides; B, Biosynthesis and degradation of murein sacculus and peptidoglycan; C, Chemotaxis and motility; D, Pathogenesis; E, Toxin production and resistance; F, Adaptations to atypical conditions.