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Table 2 List of primers and optimal PCR amplification conditions used for the quantitative Real-time RT-PCR

From: Proteomic analysis of differentially expressed proteins in Penaeus monodon hemocytes after Vibrio harveyi infection

Gene

Primer name (Sequence (5'-3'))

Final concentration (nM)

Temperature (°C)/time (sec)

   

Denaturation

Annealing

Elongation

Alpha-2-macroglobulin

A2M_F (CCTCATATCCGGCTTCATCC)

100

95/10

60/20

72/10

 

A2M_R (CCGTGAACTCCTCGATGTAG)

100

   

14-3-3 protein epsilon

14-3-3_F (GTATCTTGCCGAGACCGCCACT)

200

95/10

63/15

72/20

 

14-3-3_R (CAATGTCGCTGGCTGCCTTGT)

200

   

Hemocyanin

Hemocyanin_F [46] (AAGTGCTCGGAATCTTCGGTAA)

200

95/10

60/15

72/10

 

Hemocyanin_R [46] (CCTGCCTCGATCTTTGCAA)

200

   

Beta actin

Beta_F (GAACCTCTCGTTGCCGATGGTG)

200

95/30

60/30

72/45

 

Beta_R (GAAGCTGTGCTACGTGGCTCTG)

200

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