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Table 3 Time-dependent upregulated protein spots in response to Pb

From: Characterization of proteome alterations in Phanerochaete chrysosporium in response to lead exposure

   

Treatment/Control ratio

  

KOG class

Protein ID

Putative Function

1h

2h

4h

8h

Subcellular location *

Multiple spots

Amino acid transport and metabolism

130118a

Glutamine synthetase

1,50

3,61

3,88

1,08

C

4

 

139663

Methionine synthase II (cobalamin-independent)

3,51

0,58

2,29

1,58

C

3

Carbohydrate transport and metabolism

137211

Dihydroxyacetone kinase/glycerone kinase

9,99

3,50

3,37

3,93

C

-

 

132198c

Glyceraldehyde 3-phosphate dehydrogenase

7,40

7,00

5,20

4,80

C

5

 

132198d

Glyceraldehyde-3-phosphate dehydrogenase

new

new

new

new

C

5

 

132198e

Glyceraldehyde 3-phosphate dehydrogenase

1,29

4,90

4,71

6,09

C

5

Energy production and conversion

133289

Aldehyde dehydrogenase

4,36

3,09

2,30

3,34

C

-

 

134389

NADH-dependent flavin oxidoreductase/12-oxophytodienoate reductase

4,74

0,82

1,29

1,33

C

-

 

138693

Aldehyde dehydrogenase

new

new

new

new

C

-

 

123932a

Fumarate reductase, flavoprotein subunit

3,54

2,39

1,37

1,87

C

2

 

129245a

NAD-dependent malate dehydrogenase

new

new

new

-

Mit

5

 

133757c

Glyoxylate/hydroxypyruvate reductase (D-isomer-specific 2-hydroxy acid dehydrogenase superfamily)

new

new

new

new

C

3

 

135576b

Inorganic pyrophosphatase/Nucleosome remodeling factor, subunit NURF38

1,24

1,34

8,02

0,84

Nuc

4

General function prediction only

10307

1,4-benzoquinone reductase-like; Trp repressor binding protein-like/protoplast-secreted protein

0,44

0,87

13,14

4,72

C

-

 

132851

Glyoxylase

6,16

1,99

4,02

2,30

C

-

NA

140431a

Putative Protein

-

new

new

new

C

4

 

140431b

Putative Protein

19,30

9,80

19,40

22,90

C

4

 

140431c

Putative Protein

4,29

2,2

0,75

2,3

C

4

Posttranslational modification, protein turnover, chaperones

1827

20S proteasome, regulatory subunit alpha type PSMA6/SCL1

4,60

2,20

2,10

2,70

Mit

2

RNA processing and modification

8607

Splicing factor RNPS1, SR protein superfamily

3,32

3,12

0,95

3,5

Cyt_Nuc

-

Secondary metabolites biosynthesis, transport and catabolism

4796d

Alcohol dehydrogenase, class V

new

new

new

new

C

4

 

127894

Zinc-containing alcohol dehydrogenase superfamily

5,21

3,22

5,32

6,55

C

-

Translation, ribosomal structure and biogenesis

130203

60S acidic ribosomal protein P0

new

new

new

new

C

-

  1. *C; cytoplasmic, Ext; extracellular, Mit; mitochondrial, Nuc; Nuclear, Cysk; cytoskeleton, Cyto_nuc; cytoplasmic_nuclear