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Table 1 Proteins identified by MALDI-TOF/TOF from the second dimension BN/SDS-PAGE.

From: Analysis of the photosynthetic apparatus in transgenic tobacco plants with altered endogenous cytokinin content: a proteomic study

Spot number

Protein Name

SwissProt Accession number

MW

pI

1

ATP synthase subunit alpha, chloroplastic [Nicotiana tabacum]

P00823

55477,1

5,14

2

Photosystem II CP47 chlorophyll apoprotein [Cucumis sativus]

Q2QD63

55982,37

6,28

3

Photosystem II CP43 chlorophyll apoprotein [Ranunculus macranthus]

Q4FFN5

52017,79

6,68

4

Oxygen-evolving enhancer protein 1, [chloroplastic Nicotiana tabacum]

Q40459

35377,09

5,89

5

Chlorophyll a-b binding protein 40, chloroplastic [Nicotiana tabacum]

P27495

28450,22

5,48

6

Chlorophyll a-b binding protein 13, chloroplastic [Solanum lycopersicum]

P27489

28661,44

5,09

7

Chlorophyll a-b binding protein 6A, chloroplastic [Solanum lycopersicum]

P12360

26785,52

5,82

8

Photosystem I reaction center subunit II, chloroplastic [Nicotiana sylvestris]

P29302

22466,7

9,78

9

Photosystem I reaction center subunit II, chloroplastic [Nicotiana sylvestris]

P29302

22466,7

9,78

10

Photosystem I reaction center subunit III, chloroplastic [Spinacia oleracea]

P12355

25567,52

9,4

11

Photosystem II CP43 chlorophyll apoprotein [Aethionema grandiflora]

A4QJJ5

52042,77

6,71

12

Oxygen-evolving enhancer protein 1, chloroplastic [Nicotiana tabacum]

Q40459

35377,09

5,89

13

Ribulose bisphosphate carboxylase large chain (Fragment) [Nelumbo lutea]

Q05800

44231,36

6,4

14

Photosystem I P700 chlorophyll a apoprotein A1 [Nicotiana tomentosiformis]

Q33C36

83206,56

6,67

15

Photosystem II CP43 chlorophyll apoprotein [Ranunculus macranthus]

Q4FFN5

52017,79

6,68

16

Oxygen-evolving enhancer protein 1, chloroplastic [Nicotiana tabacum]

Q40459

35377,09

5,89

17

Photosystem II D2 protein [Dioscorea elephantipes]

A6MMK2

39765,89

5,34

18

Chlorophyll a-b binding protein 40, chloroplastic [Nicotiana tabacum]

P27495

28450,22

5,48

19

Chlorophyll a-b binding protein 6A, chloroplastic [Solanum lycopersicum]

P12360

26785,52

5,82

20

Photosystem I reaction center subunit II, chloroplastic [Nicotiana sylvestris]

P29302

22466,7

9,78

21

Photosystem I reaction center subunit II, chloroplastic [Nicotiana sylvestris]

P29302

22466,7

9,78

22

Photosystem I reaction center subunit IV B, chloroplastic [Nicotiana sylvestris]

Q41229

15214,74

9,74

23

Photosystem I reaction center subunit III, chloroplastic [Flaveria trinervia]

P46486

25366,48

9,35

24

Cytochrome b559 subunit alpha [Arabidopsis thaliana]

P56779

9380,7

4,83

25

ATP synthase subunit alpha, chloroplastic [Nicotiana tabacum]

P00823

55477,1

5,14

26

Ribulose bisphosphate carboxylase large chain [Nicotiana sylvestris]

Q3C1J4

53377,98

6,41

27

Ribulose bisphosphate carboxylase large chain (Fragment) [Adoxa moschatellina]

P28378

52159,14

6,13

28

Photosystem II CP47 chlorophyll apoprotein [Barbarea verna]

A4QKD1

56204,47

6,4

30

Photosystem Q(B) protein [Leptosira terrestri]

A6YGB8

38353,08

5,52

31

Photosystem Q(B) protein [Leptosira terrestris]

A6YGB8

38353,08

5,52

32

Cytochrome b559 subunit alpha [Arabidopsis thaliana]

P56779

9380,7

4,83

33

Apocytochrome f [Nicotiana tabacum]

P06449

35337,77

9,12

35

Cytochrome b6-f complex iron-sulfur subunit 2, chloroplastic [Nicotiana tabacum]

Q02585

24491,28

8,15

36

Cytochrome b6-f complex subunit 4 [Agrostis stolonifera]

A1EA39

17534,51

6,56

37

ATP synthase subunit b, chloroplastic [Nicotiana tabacum]

yP06290

20917,96

8,76

38

Ferredoxin--NADP reductase, leaf-type isozyme, chloroplastic [Nicotiana tabacum]

O04977

40704,59

8,37

39

Fructose-bisphosphate aldolase, chloroplastic [Spinacia oleracea]

P16096

42726,8

6,85

40

Photosystem II 22 kDa protein, chloroplastic [Nicotiana tabacum]

Q9SMB4

29068,73

6,04

41

Apocytochrome f [Nicotiana tabacum]

P06449

35337,77

9,12

42

Photosystem II 22 kDa protein, chloroplastic [Nicotiana tabacum]

Q9SMB4

29068,73

6,04

43

Photosystem II CP43 chlorophyll apoprotein [Aethionema grandiflora]

A4QJJ5

52042,77

6,71

44

ATP synthase subunit beta, chloroplastic [Nicotiana plumbaginifolia]

P69370

53548,81

5,09

45

ATP synthase subunit alpha, chloroplastic [Nicotiana tabacum]

P00823

55477,1

5,14

46

Chlorophyll a-b binding protein CP26, chloroplastic [Arabidopsis thaliana]

Q9XF89

30194,7

6

47

Ferredoxin--NADP reductase, leaf-type isozyme, chloroplastic [Nicotiana tabacum]

O04977

40704,59

8,37

48

ATP synthase subunit alpha, chloroplastic [Nicotiana tabacum]

P00823

55477,1

5,14

49

ATP synthase subunit alpha, chloroplastic [Nicotiana tabacum]

P00823

55477,1

5,14

50

ATP synthase gamma chain, chloroplastic [Nicotiana tabacum]

P29790

41705,96

8,16

51

ATP synthase subunit beta, chloroplastic [Nicotiana tabacum]

P00826

53577,78

5

52

Oxygen-evolving enhancer protein 1, chloroplastic [Nicotiana tabacum]

Q40459

35377,09

5,89

  1. Additional information about the identified proteins can be found in Additional file 1, table S1.