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Table 2 Comparison with other feature extraction methods with SVM

From: Identification of protein-RNA interaction sites using the information of spatial adjacent residues

Feature set

Accuracy (%)

MCC

SeqProfile a

76.60

0.48

SpaPF

78.00

0.53

SeqASA b

63.28

0.16

SpawASA

68.00

0.30

  1. a) SeqProfile: sequence neighbour residues profiles [9].
  2. b) SeqASA: sequence neighbour residues accessibility solvent area [7].