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Table 1 Evaluations of different clustering algorithms on the test graph X 0,0

From: A binary matrix factorization algorithm for protein complex prediction

algorithm

Sn

PPV

Acc

Sep

#C

true

1.0000

0.7219

0.8497

0.7826

216

BMF(opt)

0.9844

0.8459

0.9125

0.8652

179

BMF(avg)

0.9764

0.7805

0.8730

0.7861

147

MCL(1.8)

0.9920

0.7689

0.8734

0.8474

157

MCL(opt)

0.9818

0.7936

0.8827

0.8560

164

SC(10%,1%)

0.6788

0.2661

0.4250

0.0238

622

  1. It presents evaluation results of different clustering algorithms on the test graph X 0,0 (#C: number of predicted complexes).