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Table 1 Classification accuracy

From: SProt: sphere-based protein structure similarity algorithm

Method Family Superfamily Fold RMSD Cover TM-score
SProt 90.4 96.9 98.6 4.14 81.1 0.63
Vorometric 90.7 94.9 97.6 2.43 87.2 0.74
PPM 88.3 94.5 97.5 n/a n/a n/a
db-iTM 86.6 95.8 98.2 n/a n/a n/a
Vorolign 86.4 92.4 97.7 1.90 76.3 0.74
CE 84.6 91.9 94.1 1.95 78.2 0.77
BLAST 48.9 52.5 52.8
  1. The evaluation of classification accuracy was performed on the Vorolign dataset for different levels of the SCOP hierarchy (family, superfamily and fold). The table also describes average characteristics (RMSD, alignment cover and TM-score) of the most similar structures to the query. The values of the db-iTM method are taken from [13], and the values of the other compared methods are taken from [10].