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Table 3 Some predicted clusters which matched with benchmark complexes

From: Ontology integration to identify protein complex in protein interaction networks

ID

Predicted clusters

Benchmark complexes ID in CYC2008

NA

p-value

    

GO_Component

GO_Function

GO_Process

1

YBR123C YOR110W YPL007C YDR362C YAL001C YGR047C

402

1

0

3.16E-06

2.59E-05

2

YLR208W YGL092W YDL116W YJR042W YKL057C YGL100W

181

1

1.10E-05

2.50E-06

3.81E-06

3

YLR166C YBR102C YPR055W YIL068C YER008C YDR166C YGL233W YJL085W

90

1

2.68E-06

2.06E-04

4.37E-03

4

YBR234C YLR370C YJR065C YDL029W YIL062C YNR035C YKL013C

12

1

1.19E-03

4.95E-06

9.54E-07

5

YER157W YGR120C YPR105C YNL051W YML071C YGL223C YNL041C YGL005C

112

1

1.05E-05

6.91E-02

2.50E-06

6

YHR081W YHR069C YOL021C YGR095C YGR195W YDR280W YGR158C YCR035C YDL111C YNL232W YOR001W YOL142W YOR076C

178

0.923077

3.00E-03

0

0

7

YGL048C YKL145W YHR027C YHL030W YLR421C YHR200W YDR427W YDL147W YFR052W YDL097C YPR108W YIL075C YFR004W

2

0.911157

1.09E-05

2.68E-06

4.17E-06

8

YPL210C YDL092W YML105C YPR088C YPL243W YDL051W YKL122C

248

0.857143

3.46E-06

1.19E-07

1.19E-07

9

YOR179C YDR195W YGR156W YER133W YAL043C YKL059C YPR107C YLR115W YDR301W YNL317W YKR002W YKL018W YLR277C

341

0.816667

9.43E-04

0

2.32E-06

10

YMR223W YGL066W YBR081C YGR252W YDR448W YGL112C YDR145W YMR236W YDR167W YBR198C YOL148C YLR055C YPL254W YDR392W YCL010C YDR176W YHR099W YML007W

227

0.802778

1.39E-04

0

0