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Figure 2 | Proteome Science

Figure 2

From: Fast subcellular localization by cascaded fusion of signal-based and homology-based methods

Figure 2

Two schemes for computation saving. Two schemes for reducing the computation of the subcellular localization process. In Scheme I, a full-length query sequence is presented to PSI-BLAST for computing a full-length profile; then the profile is truncated at the predicted cleavage site. The truncated profile is then aligned with all of the truncated training profiles to produce a profile-alignment score vector for classification. In Scheme II, the query sequence is truncated at the predicted cleavage site before inputting to PSI-BLAST for computing the profile. The cleavage sites are predicted by CSitePred [27] or TargetP [5].

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