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Table 2 Summary table showing significantly up-regulated or down-regulated proteins with protein proteolysis function in SOL of Daurian ground squirrels identified by iTRAQ

From: iTRAQ-based proteomic analysis of myofibrillar contents and relevant synthesis and proteolytic proteins in soleus muscle of hibernating Daurian ground squirrels (Spermophilus dauricus)

Acc no. (NCBI) Prot name [Ictidomys tridecemlineatus] MW (Da) Peptide Score 60-d hibernation vs pre-hibernation Post-hibernation vs pre-hibernation Post-hibernation vs 60-d hibernation
Fold change Sig Fold change Sig Fold change Sig
Up-regulated proteins
 gi|532073955 proteasome subunit alpha type-6 28470 8 480 1.23 * 1.248 *   
 gi|532105099 proteasome subunit alpha type-5 30824 7 614 1.226 * 1.226 *   
 gi|59800155 26S protease regulatory subunit 10B 53861 7 589 1.281 * 1.264 *   
 gi|532070252 26S proteasome non-ATPase regulatory subunit 5 isoform X1 63125 2 46 1.517 *     
 gi|532091148 26S proteasome non-ATPase regulatory subunit 4 48541 5 133 1.488 *     
 gi|532103645 proteasome subunit beta type-6 isoform X1 27252 3 115 1.295 *     
 gi|532073989 proteasome subunit alpha type-3 isoform X1 34727 5 462 1.209 *     
 gi|532066291 cytosol aminopeptidase 66612 11 731 1.202 *     
 gi|532101732 26S protease regulatory subunit 6B isoform X1 56577 4 375 1.246 *     
 gi|532088665 26S protease regulatory subunit 6A 60713 9 638 1.32 *     
 gi|532080894 calpastatin 113441 7 179    1.226 *   
 gi|532073188 endoplasmin 117277 14 399    1.316 *   
 gi|532076563 ubiquitin-like modifier-activating enzyme 1 isoform X2 135211 19 1304    1.242 *   
 gi|532069763 xaa-Pro aminopeptidase 1-like isoform X1 88255 5 128    1.485 *   
 gi|532062055 proteasome subunit alpha type-4 37964 6 247    1.289 *   
 gi|532114683 calpain small subunit 1 31666 4 257    1.301 * 1.488 *
 gi|532105581 ubiquitin carboxyl-terminal hydrolase 5 isoform X1 112519 10 369    1.221 *   
 gi|532082471 acylamino-acid-releasing enzyme 91596 7 160    1.567 *   
 gi|532088974 prolyl endopeptidase 95929 11 396    1.385 *   
 gi|532078165 ubiquitin carboxyl-terminal hydrolase isozyme L3 30900 4 212    1.591 * 1.552 *
 gi|532097874 ubiquitin fusion degradation protein 1 homolog isoform X1 41760 5 206    1.419 *   
 gi|532116708 proteasome subunit beta type-1 30778 7 506      1.283 *
 gi|532085114 26S proteasome non-ATPase regulatory subunit 12 isoform X1 66713 4 67      1.457 *
Down-regulated proteins
 gi|532064840 ubiquinone biosynthesis protein COQ9, mitochondrial 38864 6 713 0.811 *     
 gi|532078642 poly(rC)-binding protein 2 isoform X1 54651 5 470 0.732 *     
 gi|532086828 cullin-5 114587 6 160 0.774 *     
  1. Acc no. (Accession number), Prot name (protein name), MW (Molecular mass), Peptide (number of peptides matched), Score (Mowse score), Sig (*P-value < 0.05 was considered statistically significant)
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