Accessiona | Descriptionb | Gene symbol | Scorec | Pep. Nod | Log2 fold change | P-valuee | Biological process GO term |
---|---|---|---|---|---|---|---|
Transcriptional and translational regulation | |||||||
 F1S419 | Uncharacterized protein OS = Sus scrofa GN = SF3B3 PE = 4 SV = 2 - [F1S419_PIG] | None | 85.61 | 3 | −0.37 | 0.0007 | RNA binding |
 K9J4V0 | U5 small nuclear ribonucleoprotein 200 kDa helicase OS = Sus scrofa GN = SNRNP200 PE = 2 SV = 1 - [K9J4V0_PIG] | SNRNP200 | 248.18 | 9 | −0.32 | 0.0012 | Nucleic acid binding |
 F2Z5Q6 | 40S ribosomal protein S6 (Fragment) OS = Sus scrofa GN = RPS6 PE = 3 SV = 2 - [F2Z5Q6_PIG] | RPS6 | 140.42 | 4 | −0.81 | 0.0013 | Structural constituent of ribosome |
 F1SD96 | Uncharacterized protein (Fragment) OS = Sus scrofa GN = RAD23A PE = 4 SV = 1 - [F1SD96_PIG] | RAD23A | 85.25 | 3 | 1.06 | 0.0026 | Nucleotide excision repair |
 F1S8K5 | Uncharacterized protein OS = Sus scrofa GN = SUPT16H PE = 4 SV = 1 - [F1S8K5_PIG] | SUPT16H | 35.43 | 2 | −0.40 | 0.0028 | RNA binding |
 F1RZH4 | Uncharacterized protein OS = Sus scrofa PE = 4 SV = 1 - [F1RZH4_PIG] | ADAM10 | 32.67 | 1 | −0.82 | 0.0048 | Structural constituent of ribosome |
 F1SD98 | Uncharacterized protein OS = Sus scrofa GN = TRMT1 PE = 4 SV = 2 - [F1SD98_PIG] | TRMT1 | 27.72 | 1 | −0.30 | 0.0065 | Poly(A) RNA binding |
 I3LHZ6 | Uncharacterized protein OS = Sus scrofa GN = DHX9 PE = 4 SV = 1 - [I3LHZ6_PIG] | DHX9 | 994.71 | 27 | −0.30 | 0.0075 | ATP-dependent RNA helicase activity |
 F1SDV7 | Uncharacterized protein (Fragment) OS = Sus scrofa GN = TOP1 PE = 4 SV = 1 - [F1SDV7_PIG] | TOP1 | 99.93 | 4 | −0.44 | 0.0075 | DNA binding |
 P62802 | Histone H4 OS = Sus scrofa PE = 1 SV = 2 - [H4_PIG] | None | 358.11 | 7 | −0.67 | 0.0103 | DNA binding |
 F1S1V1 | Uncharacterized protein OS = Sus scrofa GN = SSB PE = 4 SV = 2 - [F1S1V1_PIG] | SSB | 196.5 | 6 | −0.73 | 0.0111 | Nucleotide binding |
 F1RS45 | DNA topoisomerase 2 OS = Sus scrofa PE = 3 SV = 2 - [F1RS45_PIG] | TOP2B | 116.62 | 6 | −0.27 | 0.0117 | DNA binding |
 F1S1X3 | Uncharacterized protein OS = Sus scrofa GN = NARS PE = 3 SV = 2 - [F1S1X3_PIG] | NARS | 262.65 | 7 | −0.30 | 0.0119 | Nucleotide binding |
 F2Z576 | Histone H3 OS = Sus scrofa GN = LOC100525821 PE = 2 SV = 1 - [F2Z576_PIG] | HIST1H3E | 159.44 | 6 | −0.77 | 0.0120 | DNA binding |
 Q29194 | Ribosomal protein S2 (Fragment) OS = Sus scrofa PE = 2 SV = 1 - [Q29194_PIG] | None | 46.59 | 1 | −0.45 | 0.0138 | Structural constituent of ribosome |
 I3LFV4 | Uncharacterized protein OS = Sus scrofa GN = YBX1 PE = 4 SV = 1 - [I3LFV4_PIG] | YBX1 | 157.89 | 4 | 0.41 | 0.0148 | DNA repair |
 I3LIN8 | Histone H2A OS = Sus scrofa GN = H2AFY PE = 3 SV = 1 - [I3LIN8_PIG] | H2AFY | 224.89 | 6 | −0.52 | 0.0149 | Chromatin DNA binding |
 B0FWK5 | Ribosomal protein L5 OS = Sus scrofa GN = RPL5 PE = 2 SV = 1 - [B0FWK5_PIG] | RPL5 | 178.57 | 8 | −0.34 | 0.0165 | Structural constituent of ribosome |
 I3LCI4 | Uncharacterized protein OS = Sus scrofa GN = ZFR PE = 4 SV = 1 - [I3LCI4_PIG] | ZFR | 41.93 | 2 | −0.28 | 0.0167 | Poly(A) RNA binding |
 F1S8A5 | Uncharacterized protein OS = Sus scrofa GN = MRPS26 PE = 4 SV = 1 - [F1S8A5_PIG] | MRPS26 | 38.63 | 1 | −0.36 | 0.0181 | Poly(A) RNA binding |
 A5GFY4 | Negative elongation factor D OS = Sus scrofa GN = NELFCD PE = 3 SV = 1 - [NELFD_PIG] | NELFCD | 43.67 | 1 | −0.32 | 0.0189 | Negative regulation of transcription |
 F1S5A8 | Uncharacterized protein OS = Sus scrofa GN = DHX15 PE = 4 SV = 1 - [F1S5A8_PIG] | DHX15 | 259.43 | 8 | −0.26 | 0.0198 | ATP-dependent RNA helicase activity |
 F1RRG9 | Uncharacterized protein OS = Sus scrofa GN = SMARCA5 PE = 4 SV = 1 - [F1RRG9_PIG] | SMARCA5 | 99.44 | 3 | −0.39 | 0.0201 | DNA binding |
 F1RGP1 | Uncharacterized protein OS = Sus scrofa GN = MYBBP1A PE = 4 SV = 1 - [F1RGP1_PIG] | MYBBP1A | 445.89 | 12 | −0.50 | 0.0208 | Poly(A) RNA binding |
 F2Z5Q8 | Uncharacterized protein OS = Sus scrofa GN = LOC100519675 PE = 4 SV = 1 - [F2Z5Q8_PIG] | RPL35A | 57.33 | 2 | −0.45 | 0.0209 | Structural constituent of ribosome |
 I3L7T6 | Histone H2A OS = Sus scrofa GN = H2AFX PE = 3 SV = 1 - [I3L7T6_PIG] | H2AFX | 357.7 | 7 | −0.56 | 0.0231 | DNA binding |
 F1SMZ9 | Uncharacterized protein (Fragment) OS = Sus scrofa GN = SF3B1 PE = 4 SV = 2 - [F1SMZ9_PIG] | SF3B1 | 267.33 | 9 | −0.26 | 0.0245 | mRNA binding |
 F2Z5K9 | Histone H3 OS = Sus scrofa GN = LOC100622412 PE = 3 SV = 1 - [F2Z5K9_PIG] | LOC100622412 | 178.75 | 6 | −0.76 | 0.0270 | DNA binding |
 P53027 | 60S ribosomal protein L10a (Fragment) OS = Sus scrofa GN = RPL10A PE = 2 SV = 3 - [RL10A_PIG] | RPL10A | 154.25 | 5 | −0.34 | 0.0272 | RNA binding |
 K9IVG8 | DEAD (Asp-Glu-Ala-Asp) box helicase 21 OS = Sus scrofa GN = DDX21 PE = 2 SV = 1 - [K9IVG8_PIG] | DDX21 | 44.62 | 1 | −0.38 | 0.0292 | RNA binding |
 F2Z554 | Uncharacterized protein OS = Sus scrofa GN = RPL30 PE = 3 SV = 1 - [F2Z554_PIG] | RPL30 | 105.87 | 4 | −0.26 | 0.0323 | RNA binding |
 Q29195 | 60S ribosomal protein L10 OS = Sus scrofa GN = RPL10 PE = 2 SV = 3 - [RL10_PIG] | RPL10 | 105.8 | 4 | −0.39 | 0.0350 | Structural constituent of ribosome |
 P67985 | 60S ribosomal protein L22 OS = Sus scrofa GN = RPL22 PE = 2 SV = 2 - [RL22_PIG] | RPL22 | 113.83 | 3 | −0.48 | 0.0355 | Structural constituent of ribosome |
 I7GF95 | Guanine nucleotide binding protein-like 1 OS = Sus scrofa GN = GNL1 PE = 4 SV = 1 - [I7GF95_PIG] | GNL1 | 58.56 | 1 | −0.35 | 0.0371 | Ribosome biogenesis |
 F1S8L9 | Uncharacterized protein OS = Sus scrofa GN = HNRNPU PE = 4 SV = 2 - [F1S8L9_PIG] | HNRNPU | 883.61 | 23 | −0.34 | 0.0377 | Poly(A) RNA binding |
 Q53DY5 | Histone H1.3-like protein OS = Sus scrofa GN = LOC595122 PE = 2 SV = 1 - [Q53DY5_PIG] | HIST1H1D | 251.92 | 7 | 1.29 | 0.0384 | Chromatin DNA binding |
 F1S2G3 | Uncharacterized protein (Fragment) OS = Sus scrofa GN = TBCA PE = 4 SV = 1 - [F1S2G3_PIG] | TBCA | 78.18 | 2 | 0.31 | 0.0389 | Poly(A) RNA binding |
 F2Z5P1 | Histone H2A (Fragment) OS = Sus scrofa GN = H2AFV PE = 3 SV = 1 - [F2Z5P1_PIG] | LOC100512448 | 256.74 | 5 | −0.43 | 0.0427 | DNA binding |
 F2Z553 | Uncharacterized protein OS = Sus scrofa GN = EIF1 PE = 4 SV = 1 - [F2Z553_PIG] | EIF1 | 103.66 | 2 | 0.82 | 0.0437 | Translation initiation factor activity |
 F2Z5L5 | Histone H2A OS = Sus scrofa GN = HIST2H2AC PE = 3 SV = 1 - [F2Z5L5_PIG] | HIST2H2AC | 322.1 | 5 | −0.62 | 0.0448 | DNA binding |
Redox homeostasis and detoxification | |||||||
 F1SKJ2 | Uncharacterized protein OS = Sus scrofa GN = TXN2 PE = 4 SV = 1 - [F1SKJ2_PIG] | TXN2 | 29.86 | 1 | 0.39 | 0.0043 | Cell redox homeostasis |
 F1SGS9 | Catalase OS = Sus scrofa GN = CAT PE = 3 SV = 1 - [F1SGS9_PIG] | CAT | 923.56 | 23 | 0.58 | 0.0151 | Protect cells from the toxic effects of hydrogen peroxide |
 I3LDJ8 | Uncharacterized protein OS = Sus scrofa PE = 3 SV = 1 - [I3LDJ8_PIG] | None | 303.51 | 10 | 0.77 | 0.0202 | Oxidoreductase activity |
 P12309 | Glutaredoxin-1 OS = Sus scrofa GN = GLRX PE = 1 SV = 2 - [GLRX1_PIG] | GLRX | 277.83 | 6 | 0.64 | 0.0208 | Cell redox homeostasis |
 F1SCF9 | Uncharacterized protein (Fragment) OS = Sus scrofa GN = TECR PE = 4 SV = 2 - [F1SCF9_PIG] | TECR | 38.34 | 1 | −0.37 | 0.0242 | Oxidoreductase activity |
 A5J2A8 | Thioredoxin (Fragment) OS = Sus scrofa GN = TRX PE = 4 SV = 1 - [A5J2A8_PIG] | TRX | 128.36 | 3 | 0.34 | 0.0303 | Cell redox homeostasis |
 F1SMY1 | Uncharacterized protein OS = Sus scrofa GN = TMX3 PE = 4 SV = 2 - [F1SMY1_PIG] | TMX3 | 39.1 | 2 | 0.30 | 0.0345 | Cell redox homeostasis |
 P16549 | Dimethylaniline monooxygenase [N-oxide-forming] 1 OS = Sus scrofa GN = FMO1 PE = 1 SV = 3 - [FMO1_PIG] | FMO1 | 39.55 | 2 | 1.64 | 0.0084 | Oxidative metabolism of a variety of xenobiotics |
 P04178 | Superoxide dismutase [Cu-Zn] OS = Sus scrofa GN = SOD1 PE = 1 SV = 2 - [SODC_PIG] | SOD1 | 459.04 | 9 | 0.35 | 0.0424 | Superoxide dismutase activity |
Immune response and inflammation | |||||||
 A3FJ41 | MHC class I antigen (Fragment) OS = Sus scrofa GN = SLA-1 PE = 4 SV = 1 - [A3FJ41_PIG] | SLA-1 | 120.03 | 5 | 0.35 | 0.0050 | Immune response |
 F1RGC8 | Uncharacterized protein OS = Sus scrofa GN = NLRP6 PE = 4 SV = 3 - [F1RGC8_PIG] | NLRP6 | 119.58 | 4 | −0.32 | 0.0061 | Activation of NF-κB |
 F1RFM7 | Uncharacterized protein OS = Sus scrofa GN = AIMP2 PE = 4 SV = 1 - [F1RFM7_PIG] | AIMP2 | 232.75 | 6 | −0.29 | 0.0076 | Metabolism of xenobiotics |
 A2SZV5 | Tax1 binding protein 3 (Fragment) OS = Sus scrofa PE = 4 SV = 1 - [A2SZV5_PIG] | None | 55.14 | 1 | 0.29 | 0.0133 | Negative regulation of NF-κB |
 B8XX91 | DNA-dependent activator of IFN-regulatory factor OS = Sus scrofa GN = DAI PE = 2 SV = 1 - [B8XX91_PIG] | DAI | 100.5 | 4 | 0.70 | 0.0137 | Innate immune responses |
 Q8WNQ7 | N-acetylgalactosamine-6-sulfatase OS = Sus scrofa GN = GALNS PE = 2 SV = 1 - [GALNS_PIG] | GALNS | 52.52 | 1 | 0.60 | 0.0311 | Degradation of the glycosaminoglycans keratan sulfate |
 B8XTR8 | Granzyme H OS = Sus scrofa GN = gzmH PE = 2 SV = 1 - [B8XTR8_PIG] | gzmH | 168.84 | 6 | −0.67 | 0.0272 | Serine-type endopeptidase activity |
 A5GFQ5 | Protein canopy homolog 3 OS = Sus scrofa GN = CNPY3 PE = 3 SV = 1 - [CNPY3_PIG] | CNPY3 | 40.13 | 2 | −0.63 | 0.0376 | Receptor binding for proper TLR folding |
Energy metabolism | |||||||
 Q1ACV5 | Transporter associated with antigen processing 1 OS = Sus scrofa PE = 2 SV = 1 - [Q1ACV5_PIG] | None | 298.67 | 7 | −0.32 | 0.0030 | Triggers ATP hydrolysis |
 F1RIG0 | Uncharacterized protein (Fragment) OS = Sus scrofa PE = 4 SV = 1 - [F1RIG0_PIG] | None | 47.28 | 2 | −0.27 | 0.0169 | ATP binding |
 Q7SIB7 | Phosphoglycerate kinase 1 OS = Sus scrofa GN = PGK1 PE = 1 SV = 3 - [PGK1_PIG] | PGK1 | 850.39 | 23 | 0.30 | 0.0160 | Conversion of 1,3-diphosphoglycerate to 3-phosphoglycerate |
 H9BYW2 | Acyl-coenzyme A oxidase OS = Sus scrofa GN = ACOX1 PE = 2 SV = 1 - [H9BYW2_PIG] | ACOX1 | 370.35 | 10 | 0.91 | 0.0200 | Fatty acid beta-oxidation |
 I3LEN7 | Uncharacterized protein OS = Sus scrofa GN = ALDH1L1 PE = 3 SV = 1 - [I3LEN7_PIG] | ALDH1L1 | 49.04 | 2 | 0.40 | 0.0245 | Formate oxidation |
 F1S0Y8 | Uncharacterized protein OS = Sus scrofa GN = ADH4 PE = 3 SV = 2 - [F1S0Y8_PIG] | ADH4 | 40.7 | 2 | 0.67 | 0.0309 | Oxidation of long-chain aliphatic alcohols |
 A7UIU7 | ATP citrate lyase OS = Sus scrofa GN = ACL PE = 2 SV = 1 - [A7UIU7_PIG] | ACL | 468.98 | 14 | −0.38 | 0.0374 | ATP binding |
Protein metabolism and modification | |||||||
 F1RIF3 | Uncharacterized protein OS = Sus scrofa GN = FAH PE = 4 SV = 1 - [F1RIF3_PIG] | FAH | 38.37 | 2 | 0.39 | 0.0010 | Catabolism of the amino acid phenylalanine |
 Q9GK25 | Peptidyl-prolyl cis-trans isomerase (Fragment) OS = Sus scrofa PE = 2 SV = 1 - [Q9GK25_PIG] | None | 266.1 | 7 | 1.43 | 0.0025 | Accelerate the folding of proteins |
 I3L739 | Uncharacterized protein OS = Sus scrofa GN = JMJD6 PE = 4 SV = 1 - [I3L739_PIG] | JMJD6 | 39.99 | 1 | −0.29 | 0.0193 | Protein hydroxylases |
 I3LK37 | Uncharacterized protein (Fragment) OS = Sus scrofa PE = 3 SV = 1 - [I3LK37_PIG] | GALNT7 | 33.39 | 2 | −0.30 | 0.0248 | Protein glycosylation |
 F1RNR6 | 4-hydroxyphenylpyruvate dioxygenase OS = Sus scrofa GN = HPD PE = 3 SV = 2 - [F1RNR6_PIG] | HPD | 31 | 1 | 0.35 | 0.0391 | Aromatic amino acid family metabolic process |
Lipid metabolism | |||||||
 I3LM15 | Uncharacterized protein OS = Sus scrofa GN = AGPS PE = 4 SV = 1 - [I3LM15_PIG] | AGPS | 48.77 | 1 | −0.36 | 0.0019 | Lipid biosynthetic process |
 Q9GJX2 | Diazepam binding inhibitor (Fragment) OS = Sus scrofa GN = DBI PE = 2 SV = 1 - [Q9GJX2_PIG] | DBI | 80.13 | 3 | 0.91 | 0.0057 | Long-chain fatty acyl-CoA binding, triglyceride metabolic process |
 P27917 | Apolipoprotein C-III OS = Sus scrofa GN = APOC3 PE = 1 SV = 2 - [APOC3_PIG] | APOC3 | 226.39 | 7 | 0.78 | 0.0241 | High-density lipoprotein particle receptor binding |
Cell cytoskeleton | |||||||
 P10668 | Cofilin-1 OS = Sus scrofa GN = CFL1 PE = 1 SV = 3 - [COF1_PIG] | CFL1 | 704.02 | 15 | 0.31 | 0.0059 | Cytoskeleton organization |
 Q5G6W0 | Cofilin-2 (Fragment) OS = Sus scrofa PE = 2 SV = 1 - [Q5G6W0_PIG] | CFL1 | 48.67 | 2 | 0.43 | 0.0073 | Cytoskeleton organization |
 B5APV0 | Actin-related protein 2/3 complex subunit 5 OS = Sus scrofa GN = ARPC5 PE = 2 SV = 1 - [B5APV0_PIG] | ARPC5 | 170.99 | 6 | 0.30 | 0.0167 | Structural constituent of cytoskeleton |
Miscellaneous | |||||||
 Q9TSA7 | Calmodulin (Fragments) OS = Sus scrofa PE = 4 SV = 1 - [Q9TSA7_PIG] | None | 108.72 | 4 | 1.11 | 0.0008 | Calcium ion binding |
 K7GKQ1 | Uncharacterized protein OS = Sus scrofa GN = RAB9A PE = 3 SV = 1 - [K7GKQ1_PIG] | RAB9A | 26.6 | 1 | −0.40 | 0.0071 | Cytoskeletal signaling |
 F1RKI3 | Uncharacterized protein OS = Sus scrofa GN = HINT1 PE = 4 SV = 1 - [F1RKI3_PIG] | HINT1 | 80.55 | 3 | 0.32 | 0.0073 | Tumor suppressing |
 I3LSY0 | Uncharacterized protein OS = Sus scrofa GN = ACSM4 PE = 4 SV = 1 - [I3LSY0_PIG] | ACSM4 | 21.13 | 1 | 0.86 | 0.0179 | Catalytic activity |
 D0G6R8 | Phosphatidate cytidylyltransferase OS = Sus scrofa GN = CDS2 PE = 2 SV = 1 - [D0G6R8_PIG] | CDS2 | 33.01 | 1 | −0.39 | 0.0192 | Synthesis of phosphatidylglycerol |
 Q95332 | Betaine--homocysteine S-methyltransferase 1 (Fragment) OS = Sus scrofa GN = BHMT PE = 1 SV = 3 - [BHMT1_PIG] | BHMT | 110.41 | 4 | 1.10 | 0.0193 | Regulation of homocysteine metabolism |
 F1RS34 | Uncharacterized protein OS = Sus scrofa GN = GAPVD1 PE = 4 SV = 2 - [F1RS34_PIG] | GAPVD1 | 22.69 | 1 | −0.40 | 0.0207 | Signal transduction |
 F1ST01 | Uncharacterized protein OS = Sus scrofa GN = SELENBP1 PE = 4 SV = 1 - [F1ST01_PIG] | SELENBP1 | 936.42 | 22 | 0.33 | 0.0209 | Selenium binding |
 Q9TV62 | Myosin-4 OS = Sus scrofa GN = MYH4 PE = 2 SV = 1 - [MYH4_PIG] | MYH4 | 192.94 | 7 | −0.83 | 0.0336 | Motor activity |
 F1RN91 | Uncharacterized protein (Fragment) OS = Sus scrofa PE = 4 SV = 2 - [F1RN91_PIG] | MYO18A | 35.04 | 2 | 0.28 | 0.0355 | Cell migration |
 F1RPC8 | Uncharacterized protein OS = Sus scrofa GN = CRYM PE = 4 SV = 2 - [F1RPC8_PIG] | CRYM | 59.33 | 2 | 0.49 | 0.0392 | Thyroid hormone binding |
 F2Z5W6 | Uncharacterized protein OS = Sus scrofa GN = LAMTOR1 PE = 4 SV = 1 - [F2Z5W6_PIG] | LAMTOR1 | 26.54 | 1 | −0.37 | 0.0410 | Guanyl-nucleotide exchange factor activity |
 Q29069 | Myosin light chain OS = Sus scrofa PE = 2 SV = 2 - [Q29069_PIG] | None | 58.61 | 3 | −0.38 | 0.0458 | Calcium ion binding |
 O19175 | Casein kinase I isoform alpha (Fragment) OS = Sus scrofa GN = CSNK1A1 PE = 2 SV = 1 - [KC1A_PIG] | CSNK1A1 | 51.13 | 1 | −0.44 | 0.0473 | Protein kinase activity |
 N0E654 | Casein kinase II b subunit splicing isoform 476 (Fragment) OS = Sus scrofa GN = Csnk2b PE = 2 SV = 1 - [N0E654_PIG] | Csnk2b | 63.97 | 2 | −0.27 | 0.0039 | Cell proliferation and cell differentiation |