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Table 2 Most highly common differentially upregulated and downregulated proteins in E.coli

From: Label-free quantitative proteomic analysis of the inhibition effect of Lactobacillus rhamnosus GG on Escherichia coli biofilm formation in co-culture

Upregulated protein Protein ID p value Log2FC Protein description
bioD2 P0A6E9 2.10E-05 1.71 ATP-denpendent dethiobiotin synthetase BioD2
panD P0A790 5.20E-05 3.63 Aspartate 1-decarboxylase
rpsP P0A7T3 2.83E-04 1.86 30S ribosomal protein S16
hybC P0ACE0 3.31E-04 2.01 Hydrogenase-2 large chain
rhIB P0A8J8 3.77E-04 1.06 ATP-dependent RNA helicase RhlB
mlaC P0ADV7 4.10E-04 3.60 Intermembrane phospholipid transport system binding protein MlaC
fimA P04128 5.11E-04 1.81 Type-1 fimbrial protein, A chain
hdeA P0AES9 7.83E-04 1.17 Acid stress chaperone HdeA
cysQ P22255 1.89E-03 1.41 3′(2′),5′-bisphosphate nucleotidase CysQ
ygiW P0ADU5 2.06E-0 2.17 Protein YgiW
Downregulated protein Protein ID P value Log2FC Protein description
bamE P0A937 9.90E-04 −0.90 Outer membrane protein assembly factor BamE
yejL P0AD24 1.29E-03 −3.09 UPF0352 protein YejL
rpsN P0AG59 2.60E-03 −2.17 30S ribosomal protein S14
gpmA P62707 4.76E-03 −0.52 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase
dnaK P0A6Y8 9.35E-03 −0.27 Chaperone protein DnaK
sohB P0AG14 1.43E-02 −0.45 Probable protease SohB
ychF P0ABU2 1.63E-02 −0.35 Ribosome-binding ATPase YchF
guaB P0ADG7 2.64E-02 −0.97 Inosine-5′-monophosphate dehydrogenase
ftsX P0AC30 3.38E-02 −2.46 Cell division protein FtsX
ompA P0A910 4.93E-02 −1.08 Outer membrane protein A