Table 2 Most highly common differentially upregulated and downregulated proteins in E.coli

Upregulated protein

Protein ID

p value

Log2FC

Protein description

bioD2

P0A6E9

2.10E-05

1.71

ATP-denpendent dethiobiotin synthetase BioD2

panD

P0A790

5.20E-05

3.63

Aspartate 1-decarboxylase

rpsP

P0A7T3

2.83E-04

1.86

30S ribosomal protein S16

hybC

P0ACE0

3.31E-04

2.01

Hydrogenase-2 large chain

rhIB

P0A8J8

3.77E-04

1.06

ATP-dependent RNA helicase RhlB

mlaC

P0ADV7

4.10E-04

3.60

Intermembrane phospholipid transport system binding protein MlaC

fimA

P04128

5.11E-04

1.81

Type-1 fimbrial protein, A chain

hdeA

P0AES9

7.83E-04

1.17

Acid stress chaperone HdeA

cysQ

P22255

1.89E-03

1.41

3′(2′),5′-bisphosphate nucleotidase CysQ

ygiW

P0ADU5

2.06E-0

2.17

Protein YgiW

Downregulated protein

Protein ID

P value

Log2FC

Protein description

bamE

P0A937

9.90E-04

−0.90

Outer membrane protein assembly factor BamE

yejL

P0AD24

1.29E-03

−3.09

UPF0352 protein YejL

rpsN

P0AG59

2.60E-03

−2.17

30S ribosomal protein S14

gpmA

P62707

4.76E-03

−0.52

2,3-bisphosphoglycerate-dependent phosphoglycerate mutase

dnaK

P0A6Y8

9.35E-03

−0.27

Chaperone protein DnaK

sohB

P0AG14

1.43E-02

−0.45

Probable protease SohB

ychF

P0ABU2

1.63E-02

−0.35

Ribosome-binding ATPase YchF

guaB

P0ADG7

2.64E-02

−0.97

Inosine-5′-monophosphate dehydrogenase

ftsX

P0AC30

3.38E-02

−2.46

Cell division protein FtsX

ompA

P0A910

4.93E-02

−1.08

Outer membrane protein A