Table 3 Differentially abundant S. bicolor proteins identified from the S-plot analysis of the in solution proteomics data
Status | Protein Key | Protein Accession No. | Name of protein/similar protein | Function/ GO |
|---|---|---|---|---|
Up | 372 | C5X1U2 | Calmodulin | Calcium ion binding (GO:0005509), calcium-mediated signaling (GO:0019722) |
Up | 656 | C5YSK7 | similar to Pathogenesis related protein 5 | Defense response (GO:0006952) |
Up | 1292 | C5YBE9 | Chitin-binding type-1 domain-containing protein | Chitinase activity (GO:0004568) |
Up | 1510 | C5YSK6 | similar to Thaumatin like pathogenesis related protein 1 | Defense response (GO:0006952) |
Up | 5767 | C5Z0N8 | Peroxidase | 2 phenolic donor + H2O2 = 2 phenolic radical donor + 2 H2 |
Up | 6674 | C5XHS1 | similar to β-1,3-glucanase | Hydrolysis of O-glycosyl compounds, Carbohydrate metabolic process |
Up | 9254 | C5XCE2 | similar to Zeamatin-like protein | Inhibition of trypsin and α-amylases, Defense response (GO:0006952) |
Up | 9604 | C5Z469 | Peroxidase | 2 phenolic donor + H2O2 = 2 phenolic radical donor + 2 H2O |
Up | 10,330 | C5WZ07 | similar to Glutathione S-transferase | Glutathione transferase activity (GO:0004364) |
Up | 11,895 | C5YSV2 | similar to Thaumatin like pathogenesis related protein 5 | Defense response (GO:0006952) |
Up | 12,145 | C5YYT5 | similar to 60S acidic ribosomal protein P2B isoform X1 | Â |
Up | 13,645 | C5Z3A0 | SCP domain-containing protein | similar to pathogenesis-related protein |
Up | 14,437 | C5WWX5 | similar to Histone2A | Â |
Up | 17,199 | C5Z9A2 | similar to Thylakoid lumenal 16.5 kDa protein | Photosystem II repair (GO:0010206) |
Up | 19,206 | C5WT31 | similar to DPP6 N-terminal domain-like protein | Â |
Up | 23,877 | C5YLY5 | similar to Ribosome-recycling factor | Â |
Up | 26,619 | C5Y817 | similar to Carboxyl terminal peptidase precursor | Peptidase activity |
Up | 26,971 | C5X8S2 | SCP domain-containing protein | Cysteine rich secretory protein, allergen V5/Tpx-1 |
Up | 28,788 | C5WQE1 | similar to α-amylase/ trypsin inhibitor |  |
Up | 30,151 | C5Z8N5 | Expansin-like EG45 domain-containing protein | Chitinase activity |
Up | 31,567 | C5YGE3 | similar to Abscisic acid stress ripening 3 | Â |
Up | 31,569 | C5Y5D6 | Barwin domain-containing protein | Defense response to bacterium (GO:0042742) or fungus (GO:0050832) |
Down | 34 | A1E9V4 | Cytochrome b6 | Component of the cytochrome b6-f complex |
Down | 102 | A1E9W6 | 50S ribosomal protein L2, chloroplastic | Mitochondrial translation (GO:0032543) |
Down | 121 | A1E9W0 | 30S ribosomal protein S8, chloroplastic | Translation (GO:0006412) |
Down | 260 | C5YH12 | Caffeic acid O-methyltransferase | Flavonol biosynthetic process (GO:0051555) |
Down | 353 | C5XYX5 | similar to 60S ribosomal protein L11–1 | Translation (GO:0006412) |
Down | 1163 | C5X1Q1 | similar to Hydroxyproline-rich glycoprotein family protein | Â |
Down | 1442 | C5Y065 | Lipase_3 domain-containing protein | Lipid metabolic process (GO:0006629) |
Down | 1979 | C5YIF8 | Obg-like ATPase 1 | ATPase activity (GO:00016887), Negative regulation of response to salt stress (GO:1901001)& defense response to bacterium (GO:1900425) |
Down | 3699 | C5YRK9 | similar to Pentatricopeptide repeat-containing protein | RNA modification (GO:0009451) |
Down | 4242 | C5XW30 | similar to Phorphobilinogen deaminase | It catalyzes head to tail condensation of four porphobilinogen molecules releasing 4 ammonia molecules |
Down | 5841 | C5YRL0 | Non-specific lipid transfer protein | Bifunctional protease and alpha amylase inhibitor inhibitor, lipid binding (GO:0008289) lipid transfer (GO:0006869) protein |
Down | 6172 | C5XYT6 | FAD_binding_3 domain-containing protein | FAD binding (GO:0071949),Geranylgeranyl reductase activity (GO:0045550) |
Down | 10,362 | C5YL07 | Aldedh domain-containing protein | Betaine-aldehyde dehydrogenase activity (GO:0008802), Response to anoxia (GO:0071454) |
Down | 11,647 | C5WTC9 | Ribosomal_L16 domain-containing protein | Translation (GO:0006412) |
Down | 12,657 | C5Z267 | similar to 60S ribosomal protein L9 | Cytoplasmic translation (GO:0002181) |
Down | 14,425 | C5YAD0 | similar to 60S ribosomal protein L6 | Cytoplasmic translation (GO:0002181) |
Down | 15,418 | C5XEA1 | similar to Fructose-bisphosphate aldolase 1, chloroplastic isoform X1 | Â |
Down | 15,466 | C5YHF2 | similar to Rubredoxin family protein | Â |
Down | 15,661 | C5XZ84 | 40S ribosomal protein S8 | Translation (GO:0006412) |
Down | 15,716 | C5WZ25 | Tubulin beta chain | GTPase activity (GO:0003924), microtubule cytskeletal organization (GO:0000226) |
Down | 16,668 | C5YAI8 | Pyruvate kinase | ATP + pyruvate = ADP + H+ + phosphoenolpyruvate, Glycolytic process (GO:0006096) |
Down | 17,564 | C5YCD5 | PfkB domain-containing protein | Adenosine kinase activity (GO:0004001), Purine ribonucleoside salvage (GO:0006166) |
Down | 18,075 | C5YXW7 | Guanosine nucleotide diphosphate dissociation inhibitor | Rab GTPase binding (GO:0017137), small GTPase mediated signal transduction (GO:0007264) |
Down | 19,332 | C5X6V0 | similar to Extracellular ribonuclease LE | RNA catabolic process (GO:0006401) |
Down | 19,346 | C5YG66 | Aminomethyltransferase | Aminomethyltransferase activity (GO:0004047), Glycine decarboxylation via glycine cleavage system (GO:0019464) |
Down | 21,133 | C5YG29 | similar to 60S ribosomal protein | Translation (GO:0006412) |
Down | 22,396 | C5YCD6 | Phenylalanine ammonia-lyase | L-phenylalanine = NH4+ + trans-cinnamate, Cinnamic acid biosynthetic process (GO:0009800), L-phenylalanine catabolic process (GO:0006559) |
Down | 22,977 | C5WT26 | 40S ribosomal protein S4 | Translation (GO:0006412) |
Down | 23,733 | C5YX57 | 40S ribosomal protein S4 | Translation (GO:0006412) |
Down | 23,995 | C5YU66 | similar to Heat shock 70 kDa protein 4 | Stress response |
Down | 24,630 | C5YJP1 | HATPase_c domain-containing protein | Unfolded protein binding (GO:0051082), Response to chlorate (GO:0010157), heat (GO:0009408), salt stress (GO:0009651), water deprivation (GO:0009414) |
Down | 25,743 | C5X255 | similar to Formate tetrahydrofolate ligase | Â |
Down | 25,986 | C5WXD2 | similar to Protein TIC110, chloroplastic | Â |
Down | 26,465 | C5XXT8 | Phenylalanine ammonia-lyase | L-phenylalanine = NH4+ + trans-cinnamate, Cinnamic acid biosynthetic process (GO:0009800), L-phenylalanine catabolic process (GO:0006559) |
Down | 28,031 | C5XIT6 | Pectinesterase | [(1 → 4)-α-D-galacturonosyl methyl ester](n) + n H2O = [(1 → 4)-α-D-galacturonosyl](n) + n H+ + n methanol, cell wall modification (GO:0042545) |
Down | 28,874 | C5YMU8 | similar to Puromycin-sensitive aminopeptidase | Â |
Down | 29,216 | C5YPW0 | similar to ATP-citrate synthase | ATP binding (GO:0005524) |
Down | 30,618 | C5WZ87 | similar to Ribosomal protein S9 | Translation (GO:0006412) |
Down | 30,990 | C5XI18 | S-adenosylmethionine synthase | ATP + H2O + L-methionine = diphosphate + phosphate + S-adenosyl-L-methionine, S-adenosylmethionine biosynthetic process (GO:0006556) |
Down | 31,330 | C5YNT6 | S4 RNA-binding domain-containing protein | Translation (GO:0006412), Positive regulation of translational fidelity (GO:0045903) |
Down | 31,631 | C5WXA8 | NADPH-protochlorophyllide oxidoreductase | chlorophyllide a + NADP+ = H+ + NADPH + protochlorophyllide a |
Down | 31,939 | C5WZQ4 | similar to 50S ribosomal protein L6 | Translation (GO:0006412) |
Down | 32,283 | C5XE18 | 40S ribosomal protein SA | Cytoplasmic translation (GO:0002181), Translation (GO:0006412) |
Down | 32,318 | C5YFQ2 | Ribosomal_S17_N domain-containing protein | Translation (GO:0006412) |
Down | 32,520 | C5X0S2 | Uroporphyrinogen decarboxylase | 4 H+ + uroporphyrinogen III = 4 CO2 + coproporphyrinogen III, Protoporphyrinogen IX biosynthetic process (GO:0006782) |
Down | 32,758 | C5YS19 | SAM_MPBQ_MSBQ_MT domain-containing protein | Methyltransferase activity (GO:0008168) |