Table 6 Protein complexes and the relative quantification of subunits

Control

Control

gi|6321679

Pfk1p

18

0.9908

0.9817

0.9817

0.9908

0.9817

0.9908

gi|172140

Pfk2p

16

0.9727

0.9727

0.9908

1.0093

0.9727

0.9908

Control

Control

gi|6320016

Tfp1p

21

0.9376

0.9550

0.9550

0.9908

0.9036

0.9376

gi|6324844

Vph1p

3

0.9462

1.0000

1.0093

1.0093

0.9638

0.9550

gi|6319603

Vma2p

10

0.9550

0.9908

0.9727

0.9727

0.9376

0.9376

gi|6324907

Vma4p

3

0.8954

0.8872

0.9727

1.0864

0.8790

0.9817

gi|6322770

Vma5p

1

0.9376

1.0568

1.2359

1.1482

1.1588

1.0864

gi|6325293

Vma13p

2

0.8630

1.5136

1.5560

1.0186

1.3552

0.8872

Control

Control

gi|56404985

Atp1p

26

0.8790

1.1066

0.8017

0.7244

0.7178

0.6546

gi|84028178

Atp2p

20

0.6081

0.8472

0.4966

0.6252

0.2938

0.3597

gi|6319513

Atp3p

4

1.0471

0.6368

0.4742

0.7379

0.5012

0.7727

gi|6325179

Atp4p

3

1.0186

1.0186

0.9638

0.9376

0.9908

0.9638

gi|849218

Atp5p

5

1.0000

1.0471

0.8017

0.7516

0.8017

0.7586

gi|6322836

Atp7p

2

0.9376

0.9462

0.9120

0.9462

0.8630

0.8954

gi|6323326

Atp14p

2

1.0765

1.0471

0.9462

0.8872

1.0280

0.9638

gi|6324984

Atp15p

1

0.7379

1.0375

1.0568

1.0093

0.7943

0.7586

gi|849198

Atp17p

2

0.9817

0.8241

0.7727

0.9290

0.7656

0.9204

gi|6324495

Atp19p

1

0.8091

0.9908

1.0965

1.0965

0.9036

0.8954

gi|6320529

Tim11p

4

0.8872

0.9376

0.8630

0.9120

0.7727

0.8166

Control

Control

gi|6323077

Rps0bp

12

1.0471

1.0864

2.1677

1.9588

2.2909

2.0324

gi|665976

Rps1ap

18

1.3062

1.2246

0.8551

0.6918

1.1272

0.9120

gi|6321315

Rps2p

9

1.0864

1.1695

1.0965

0.9290

1.2023

1.0280

gi|6322605

Rps4ap

20

1.1272

1.1482

1.6144

1.3804

1.8365

1.5704

gi|895891

Rps5p

11

0.8166

1.2706

1.7378

1.3428

1.4191

1.1169

gi|6325167

Rps6ap

8

0.8630

1.3305

1.9231

1.4723

1.7701

1.3183

gi|758292

Rps7bp

6

1.1066

1.0765

1.1169

1.0280

1.2359

1.1376

gi|6320949

Rps8bp

14

1.6596

1.3428

2.3768

1.7865

3.8726

2.8576

gi|6319666

Rps9bp

14

1.0186

1.1912

1.8707

1.5417

1.9055

1.5704

gi|899490

Rps12p

4

0.8954

0.9550

1.0186

1.0568

0.9204

0.9550

gi|798915

Rps13p

4

1.0186

1.0186

1.0568

1.0280

1.0864

1.0568

gi|730453

Rps14bp

6

1.0280

1.1588

1.1482

0.9817

1.1912

1.0186

gi|6324533

Rps15p

5

1.0765

1.0568

1.0093

0.9550

1.0965

1.0280

gi|9755341

Rps16ap

8

1.0375

1.1376

1.2823

1.1272

1.3552

1.1803

gi|642297

Rps18ap

13

0.8790

1.0375

1.5849

1.4454

1.4322

1.3305

gi|6324451

Rps19ap

8

1.0093

1.0965

1.0568

0.9550

1.0765

0.9817

gi|730687

Rps20p

5

1.0765

1.0666

1.1376

1.0568

1.2359

1.1482

gi|84028229

Rps21ap

6

0.9727

1.2589

2.2491

1.7539

2.2080

1.7539

gi|6325389

Rps23bp

6

0.9550

1.0280

1.3183

1.2706

1.2706

1.2134

gi|730648

Rps24ap

13

0.8954

1.2942

1.7378

1.3305

1.5704

1.2023

gi|83288131

Rps25bp

2

1.0765

1.1376

1.1376

0.9908

1.2359

1.0765

gi|730459

Rps26bp

4

1.0375

0.9908

1.1066

1.1066

1.1588

1.1482

gi|730460

Rps27bp

5

0.8954

1.0765

1.2134

1.1169

1.0965

1.0093

gi|85695430

Rps28bp

3

1.0375

0.8872

1.0186

1.1376

1.0765

1.2023

gi|730461

Rps29ap

8

0.9204

0.9036

1.0568

1.1588

0.9817

1.0765

gi|6323196

Rps31p

12

1.3428

0.8017

0.8872

1.1272

1.2474

1.4859

Control

Control

gi|732951

Rpl1bp

6

1.0280

0.9204

1.0965

1.1803

1.1376

1.2134

gi|730569

Rpl2bp

13

1.4859

1.3062

1.1066

0.8630

1.7865

1.3552

gi|6324637

Rpl3p

23

1.1272

1.1695

1.3428

1.1482

1.5136

1.2942

gi|6325126

Rpl5p

13

1.1482

1.0765

1.9953

1.8365

2.2909

2.0701

gi|6325058

Rpl7bp

14

0.8318

1.0186

1.9953

1.8535

1.7378

1.6293

gi|6322984

Rpl8bp

16

1.0965

1.1695

1.3804

1.1695

1.5136

1.2823

gi|6321291

Rpl9ap

9

1.2134

1.1376

1.3305

1.1588

1.6144

1.4060

gi|747904

Rpl10p

13

1.1588

1.2246

1.7219

1.3677

1.9588

1.5704

gi|914973

Rpl11ap

3

1.4588

0.9290

1.3677

1.4454

2.0324

1.9953

gi|730531

Rpl13bp

12

1.3804

1.2823

1.9055

1.5136

2.5119

2.0324

gi|730454

Rpl14bp

7

1.0093

1.000

1.0965

1.0864

1.1169

1.1066

gi|927686

Rpl15ap

5

0.9908

0.9908

1.1376

1.1376

1.1376

1.1376

gi|791117

Rpl16bp

9

0.9376

0.7178

1.2474

1.6144

1.1272

1.5417

gi|6322668

Rpl17ap

6

0.5916

1.1169

2.0512

1.7539

1.2589

1.0864

gi|6324452

Rpl18ap

8

0.5495

1.8030

2.9648

1.7701

1.7865

0.9817

gi|6319559

Rpl19ap

7

1.5996

1.1169

1.8707

1.5996

2.8840

2.4660

gi|940843

Rpl20ap

21

0.7178

1.2246

1.8365

1.4723

1.3428

1.0864

gi|6319668

Rpl21ap

6

1.0280

1.0471

1.0666

1.0093

1.0965

1.0375

gi|662127

Rpl22ap

2

0.9290

1.1376

1.2823

1.1169

1.2023

1.0471

gi|6320963

Rpl23bp

4

0.9727

1.0093

1.1482

1.1169

1.1272

1.0965

gi|6321407

Rpl24ap

4

0.9727

1.3183

2.2699

1.6749

2.1478

1.6444

gi|6324445

Rpl25p

7

1.0375

1.2246

1.2706

1.0280

1.3305

1.0765

gi|6323376

Rpl26ap

9

1.0765

1.0000

1.0093

1.0000

1.0965

1.0765

gi|927763

Rpl27bp

13

1.4997

1.2359

1.2023

0.9550

1.8197

1.4454

gi|6321335

Rpl28p

7

0.7943

1.2589

2.4660

1.8880

2.0512

1.5276

gi|45270834

Rpl29p

2

0.6026

1.0093

1.2246

1.2134

0.7447

0.7311

gi|6435679

Rpl30p

4

0.8954

1.2823

1.7539

1.3428

1.5704

1.2134

gi|6320128

Rpl31ap

8

0.9908

1.0864

1.1376

1.0471

1.1376

1.0375

gi|6319378

Rpl32p

6

0.6668

1.2589

1.9409

1.5417

1.3062

1.0280

gi|6325114

Rpl33ap

2

0.9727

0.9817

1.0471

1.0568

1.0186

1.0375

gi|9755331

Rpl34ap

1

1.0666

1.1169

1.0186

0.9036

1.1066

0.9817

gi|927770

Rpl35bp

3

0.8395

1.0864

1.1912

1.0864

1.0093

0.9204

gi|6325006

Rpl36bp

4

1.0000

0.9727

0.9908

1.0093

1.0093

1.0186

gi|6323214

Rpl37bp

3

0.9550

1.0471

1.0093

0.9638

0.9727

0.9204

gi|6322272

Rpl39p

1

0.8395

1.0864

1.4454

1.3305

1.2246

1.1169

gi|6322947

Rpl40bp

9

1.0280

1.2134

1.0965

0.8954

1.1482

0.9376

gi|6681849

Rpl42ap

3

1.5136

1.5560

1.556

0.9638

2.3988

1.5276

gi|805027

Rpl43bp

5

1.1588

1.0965

1.5136

1.3804

1.7701

1.6144