Skip to main content

Table 4 Data Set IV: the amino acid sequences and the corresponding HP sequences.

From: An effective evolutionary algorithm for protein folding on 3D FCC HP model by lattice rotation and generalized move sets

PDB ID.

Len.

Sequences (original and HP transform)

4BP2

123

ALWQFNGMIKCKIPSSEPLLDFNNYGCYCGLGGSGTPVDDLDRCCQTH

DNCYKQAKKLDSCKVLVDNPYTNNYSYSCSNNEITCSSENNACEAFIC

NCDRNAAICFSKVPYNKEHKNLDKKNC

  

PHHPHPPHHPHPHPPPPPHHPHPPHPHHHPHPPPPPPHPPHPPHHPPPPPH

HPPPPPHPPHPHHHPPPHPPPHPHPHPPPPHPHPPPPPPHPPHHHPHPPPP PHHHPPHPHPPPPPPHPPPPH

2AAS

124

KETAAAKFERQHMDSSTSAASSSNYCNQMMKSRNLTKDRCKPVNTFVH

ESLADVQAVCSQKNVACKNGQTNCYQSYSTMSITDCRETGSSKYPNCAY

KTTQANKHIIVACEGNPYVPVHFDASV

  

PPPPPPPHPPPPHPPPPPPPPPPPHHPPHHPPPPHPPPPHPPHPPHHPPPHPP

HPPHHPPPPHPHPPPPPPHHPPHPPHPHPPHPPPPPPPHPPHPHPPPPPPPP HHHPHPPPPHHPHPHPPPH

5LYZ

129

KVFGRCELAAAMKRHGLDNYRGYSLGNWVCAAKFESNFNTQATNRNT

DGSTDYGILQINSRWWCNDGRTPGSRNLCNIPCSALLSSDITASVNCAKK

IVSDGNGMNAWVAWRNRCKGTDVQAWIRGCRL

  

PHHPPHPHPPPHPPPPHPPHPPHPHPPHHHPPPHPPPHPPPPPPPPPPPPPPH

PHHPHPPPHHHPPPPPPPPPPHHPHPHPPHHPPPHPPPHPHPPPHHPPPPPH PPHHPHPPPHPPPPHPPHHPPHPH

9WGA

170

RCGEQGSNMECPNNLCCSQYGYCGMGGDYCGKGCQNGACWTSKRCGS

QAGGATCPNNHCCSQYGHCGFGAEYCGAGCQGGPCRADIKCGSQSGGK LCPNNLCCSQWGFCGLGSEFCGGGCQSGACSTDKPCGKDAGGRVCTNN

YCCSKWGSCGIGPGYCGAGCQSGGCDA

  

PHPPPPPPHPHPPPHHHPPHPHHPHPPPHHPPPHPPPPHHPPPPHPPPPPPPP

HPPPPHHPPHPPHPHPPPHHPPPHPPPPHPPPHPHPPPPPPPHHPPPHHHPPH PHHPHPPPHHPPPHPPPPHPPPPPHPPPPPPPHHPPPHHHPPHPPHPHPPPHH PPPHPPPPHPP

1RBP

174

ERDCRVSSFRVKENFDKARFSGTWYAMAKKDPEGLFLQDNIVAEFSVDE

TGQMSATAKGRVRLLNNWDVCADMVGTFTDTEDPAKFKMKYWGVASF LQKGNDDHWIVDTDYDTYAVQYSCRLLNLDGTCADSYSFVFSRDPNGLP

PEAQKIVRQRQEELCLARQYRLIVHNGYC

  

PPPHPHPPHPHPPPHPPPPHPPPHHPHPPPPPPPHHHPPPHHPPHPHPPPPPHP

PPPPPPHPHHPPHPHHPPHHPPHPPPPPPPPHPHPHHPHPPHHPPPPPPPHHH PPPHPPHPHPHPHPHHPHPPPHPPPHPHHHPPPPPPHPPPPPPHHPPPPPPHH HPPPHPHHHPPPHH