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Table 1 The Performance Comparison of MCL on three dynamic networks.

From: Detecting protein complexes from active protein interaction networks constructed with dynamic gene expression profiles

Network

#P C

#M KC(OS= 0.2)

#M KC(OS= 1)

Sn

Sp

F

NF-APIN

1686

235

33

0.738

0.289

0.415

APPIN

2013

256

37

0.773

0.257

0.386

TC-PIN

2034

220

23

0.696

0.212

0.326

  1. OS is the overlapping score, #PC is the number of clusters predicted by MCL in each network, and #MKC is the number of known complexes matched by clusters when OS ≥ 0.2 or OS ≥ 1. The sensitivity, specificity and f-measure are listed in the table when OS ≥ 0.2.
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Proteome Science

ISSN: 1477-5956