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Table 4 Summary of the computing power of different docking protocols.

From: HopDock: a probabilistic search algorithm for decoy sampling in protein-protein docking

Protocols Number of Processor Processing
Speed (GHz)
Memory(GB) Average CPU
Time (Hours)
pyDock 2 Nodes(16 core each) 2.4 65 3-5
ClusPro 16 1.3 32 (shared) 4
HopDock 2 (Core 2 Duo) 3.00 4 3-5
  1. Summary of computing power of different protein-protein docking protocols is presented to place HopDock in context.