Table 4 Summary of the computing power of different docking protocols.
From: HopDock: a probabilistic search algorithm for decoy sampling in protein-protein docking
Protocols | Number of Processor | Processing Speed (GHz) | Memory(GB) | Average CPU Time (Hours) |
|---|---|---|---|---|
pyDock | 2 Nodes(16 core each) | 2.4 | 65 | 3-5 |
ClusPro | 16 | 1.3 | 32 (shared) | 4 |
HopDock | 2 (Core 2 Duo) | 3.00 | 4 | 3-5 |