Ranking and compacting binding segments of protein families using aligned pattern clusters

Table 1 Example of patterns ${\bar{p}}^{1}$ =HELLO and ${\bar{p}}^{2}$ =MELLOW.

$S$	The Input Sequences
s ¹	bdxejrtewkwkHELLOkcmstsjavtpi
s ²	nfixtHELLOuzdovcaaxnkjfjcvwk
s ³	dimtndvkjmkHELLObkcmstsj
s ⁴	tzhgarzofdHELLOpwkxmc
s ⁵	tyjxjqnyHELLOwmopemlqfgptnwnq
s ⁶	kntywtoaxMELLOWbtiasycma
s ⁷	jilxchitivMELLOWriiiweyfzgvuyaa
s ⁸	hmlzvMELLOWorgfeb
s ⁹	xhmlzvqgcanyMELLOWgbfj
s ¹⁰	vqgcanyffcMELLOWvcnsnjvalbdvr

ISSN: 1477-5956