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Table 1 Protein expression changes induced by TGF-β (24 hour treatment) in BRI-JM01 cells, identified by WGA affinity workflow.

From: Glycoproteomic analysis of two mouse mammary cell lines during transforming growth factor (TGF)-β induced epithelial to mesenchymal transition

 

BR1

BR2

BR3

Swiss-Prot

# pept

ratio 1 ± SD

# pept

ratio ± SD

# pept

ratio ± SD

UP-REGULATED

Q06890 |CLUS_MOUSE Clusterin precursor

 

9

4.21 ± 0.51

7

4.26 ± 0.17

3

4.25 ± 0.45

P11276 |FINC_MOUSE Fibronectin precursor (FN)

 

7

1.85 ± 0.37

8

1.63 ± 0.69

3

1.92 ± 0.57

P11688 |ITA5_MOUSE Integrin alpha-5

 

2

1.41 ± 0.21

2

1.97 ± 0.16

1

9.93 ± 1.33

NP_997551.1 | Acid phosphatase, prostate isoform 1 [NP_062781.2]

 

1

1.40 ± 0.17

1

1.49 ± 0.21

0

--

O70309 |ITB5_MOUSE Integrin beta-5

 

2

1.39 ± 0.14

2

0.99 ± 0.16

2

1.55 ± 0.10

NP_058085.1 | Heterogeneous nuclear ribonucleoprotein U

 

2

1.36 ± 0.6

2

1.37 ± 0.27

0

--

P63260 |ACTG_MOUSE Actin, cytoplasmic 2 [P60710]

 

8

1.34 ± 0.21

10

1.13 ± 0.08

6

1.62 ± 0.08

DOWN-REGULATED

Q9QZM0 |UBQL2_MOUSE Ubiquilin-2

 

1

0.91 ± 0.71

3

0.69 ± 0.08

1

0.64 ± 0.16

Q8R143 |PTTG_MOUSE Pituitary tumor-transforming gene 1

 

2

0.80 ± 0.05

2

0.70 ± 0.04

0

--

P35951 |LDLR_MOUSE Low-density lipoprotein receptor precursor

 

1

0.62 ± 0.11

1

0.71 ± 0.06

0

--

Q61739 |ITA6_MOUSE Integrin alpha-6

 

13

0.57 ± 0.08

13

0.79 ± 0.04

4

0.87 ± 0.03

NP_598424.2 | Integrin beta 4

 

15

0.56 ± 0.08

15

0.84 ± 0.05

3

0.98 ± 0.22

NP_064431.2 | tumor-associated calcium signal transducer 2

 

2

0.51 ± 0.12

2

0.57 ± 0.05

0

--

  1. 1abundance in TGF-β/abundance in CTL