Protein class | Novel feature set (33 features) | Traditional feature set (451 features) | ||||||||
---|---|---|---|---|---|---|---|---|---|---|
 | Training accuracy | Test accuracy | Sensitivity | Specificity | AUC | Training accuracy | Test accuracy | Sensitivity | Specificity | AUC |
Transport | 91.3688 | 90.30 | 86.6 | 93 | 0.968 | 92.9764 | 93.39 | 89.9 | 95.9 | 0.975 |
Transcription | 90.9659 | 91.26 | 93.7 | 88.8 | 0.98 | 94.4252 | 95.33 | 96.4 | 94.3 | 0.99 |
Translation | 97.679 | 97.78 | 68.8 | 100 | 0.95 | 98.0741 | 97.78 | 68.8 | 100 | 0.996 |
Gluconate utilisation | 96.4059 | 98.11 | 85.7 | 100 | 0.997 | 97.2516 | 98.11 | 85.7 | 100 | 0.992 |
Amino acid biosynthesis | 93.7676 | 94.52 | 91.7 | 96.3 | 0.983 | 94.836 | 95.46 | 94.8 | 95.9 | 0.991 |
Fatty acid metabolism | 95.7242 | 94.44 | 72.8 | 99.2 | 0.97 | 96.2926 | 94 | 69.1 | 99.5 | 0.964 |
Acetylcholine receptor inhibitor | 99.6896 | 100 | 100 | 100 | 1 | 99.8965 | 100 | 100 | 100 | 1 |
G-protein coupled receptor | 94.4679 | 95.92 | 94.3 | 96.9 | 0.991 | 96.8745 | 97.18 | 94.7 | 98.7 | 0.993 |
Guanine nucleotide-releasing factor | 96.7429 | 96.67 | 62.9 | 99.3 | 0.956 | 98.4985 | 97.92 | 74.3 | 99.8 | 0.992 |
Fibre protein | 97.4771 | 95.89 | 33.3 | 98.6 | 0.798 | 99.2355 | 99.31 | 83.3 | 100 | 0.998 |
Transmembrane | 93.555 | 93.52 | 87.4 | 96.7 | 0.978 | 95.9719 | 97.53 | 94.2 | 99.3 | 0.995 |