Table 1 Comparison of MALDI efficiency for the workflows with two databanks
workflow | MS Spectraa) | MSMS Spectrab) | Identified peptides | MSMS efficiency(%)c) | Proteinsd) | peptides/proteins | Proteins by single peptidee) | DataBankf) |
|---|---|---|---|---|---|---|---|---|
1 (Anion) | 597 | 6868 | 3530 | 51% | 658 | 5.4 | 141 | SwissProt (Mammalia) |
2 (Cation) | 597 | 6212 | 2705 | 43% | 335 | 8.1 | 139 | SwissProt (Mammalia) |
1 (Anion) | 597 | 6868 | 4232 | 62% | 900 (555Pred) | 4.07 | 53 | NCBI (Sus Scrofa) |
2 (Cation) | 597 | 6212 | 3317 | 54% | 720 (467Pred) | 4.07 | 34 | NCBI (Sus Scrofa) |