Table 1 Prediction accuracy of test data set
|  | x ≥ 3 | x ≥ 4 | x ≥ 5 | x ≥ 6 | x ≥ 7 | x ≥ 8 | x ≥ 9 | x ≥ 10 |
|---|---|---|---|---|---|---|---|---|
Number of peptides with length ≥ x | 78 | 78 | 78 | 78 | 78 | 70 | 57 | 44 |
CompNovo 0.9 | 52 (67%) | 47 (60%) | 39 (50%) | 37 (47%) | 31 (40%) | 20 (29%) | 12 (21%) | 6 (14%) |
PEAKS Online | 75 (96%) | 69 (88%) | 64 (82%) | 58 (74%) | 52 (67%) | 40 (57%) | 29 (51%) | 20 (45%) |
PepNovo | 61 (78%) | 55 (71%) | 45 (58%) | 41 (53%) | 31 (40%) | 20 (29%) | 10 (18%) | 8 (18%) |