Skip to main content

Advertisement

Table 2 List of cytoplamic proteins of D. seriata.

From: Cytoplasmic- and extracellular-proteome analysis of Diplodia seriata: a phytopathogenic fungus involved in grapevine decline

Spot Acc. number Protein identity a PM/Seq cov./score b Identified by Total Ion scorec Experimental MW/pI Theoretical MW/pI Organism
1 gi|238498522 Phosphoglycerate kinase 12/30%/251 MASCOT   44.0/8.3 44.4/7.7 Aspergillus flavus
2 gi|67903236 Hypothetical protein (peptidyl-prolyl cis-trans isomerase or cyclophilin 1) 5/47%/219 MASCOT   18.2/8.5 17.8/8.9 Aspergillus nidulans
3 gi|169601412 Hypothetical protein (enolase) 11/30%/595 MASCOT   48.1/6.2 47.4/5.2 Phaeosphaeria nodorum
4 gi|198425409 Predicted Zn-finger U1-like 12/54%/88 MASCOT   12.3/4.9 22.6/9.5 Ciona intestinalis
5 gi|156053161 Hypothetical protein (aldehyde reductase) 2/5%/82 MASCOT 77 36.2/7.8 37.9/8.8 Sclerotinia sclerotiorum
6 gi|169625443 Hypothetical protein (triosephosphate isomerase) 7/23%/257 MASCOT   25.0/6.9 27.1/6.1 Phaeosphaeria nodorum
7 gi|46581334 Hypothetical protein 6/23%/112 MASCOT   30.2/7.4 16.8/6.3 Desulfovibrio vulgaris
8 gi|189210148 Signal transduction protein (CipC-like antibiotic response protein) 3/19%/117 MASCOT   13.1/4.8 14.9/4.9 Pyrenophora tritici-repentis
9 gi|115400267 Transaldolase 6/18%/165 MASCOT   35.2/5.2 35.2/6.2 Aspergillus terreus
10 gi|85107722 Hypothetical protein (phosphoglycerate kinase) 10/22%/217 MASCOT   45.2/7.9 45.3/6.2 Neurospora crassa
11 gi|120691 Glyceraldehyde-3-phosphate dehydrogenase 8/23%/334 MASCOT   38.3/8.2 36.6/6.7 Cochliobolus lunatus
12 gi|189204622 Fructose-bisphosphate aldolase 4/9%/156 MASCOT 140 38.4/6.7 40.2/5.5 Pyrenophora tritici-repentis
13 gi|189197705 Glycolipid transfer protein 5/25%/98 MASCOT   22.6/6.9 24.0/5.8 Pyrenophora tritici-repentis
14 gi|126139808 Hypothetical protein (thiamine biosynthesis enzyme) 5/20%/124 MASCOT   39.1/6.5 38.1/5.4 Pichia stipitis
15 gi|212542889 Glycerol dehydrogenase Gcy1 putative 4/17%/306 MASCOT   33.6/8.4 33.7/6.0 Aspergillus fumigatus
16 gi|67903236 Hypothetical protein (peptidyl-prolyl cis-trans isomerase or cyclophilin 1) 6/50%/214 MASCOT   18.5/7.9 17.8/8.9 Aspergillus nidulans
17 gi|70985178 Thiamine biosynthesis protein 8/25%/325 MASCOT   37.2/6.0 38.6/6.0 Aspergillus fumigatus
18 gi|255943905 Malate dehydrogenase 9/26%/471 MASCOT   34.6/7.9 35.8/8.4 Penicillium chrysogenum
19 gi|254583736 Hypothetical protein (fumarate reductase) 5/9%/161 MASCOT 144 56.9/6.7 54.0/8.6 Zygosaccharomyces rouxii
20 gi|154285406 Nucleoside-diphosphate kinase 6/38%/234 MASCOT   13.3/9.4 16.9/7.8 Ajellomyces capsulatus
21 gi|164429080 Adenosine kinase 5/12%/252 MASCOT 236 38.1/5.3 49.4/6.0 Neurospora crassa
22 gi|218722748 Conserved hypothetical protein 4/19%/157 MASCOT   51.4/4.9 42.8/5.8 Talaromyces stipitatus
23 gi|189196154 NADP-specific glutamate dehydrogenase 10/22%/504 MASCOT   46.4/7.5 49.1/5.9 Pyrenophora tritici-repentis
24 gi|58265982 Eukaryotic translation initiation factor 5A-1 5/30%/391 MASCOT   20.0/4.9 17.9/5.3 Cryptococcus neoformans
25 gi|145613040 Conserved hypothetical protein (mitochondrial peroxiredoxin PRX1) 4/21%/306 MASCOT   25.4/6.6 25.2/5.7 Magnaporthe grisea
26 gi|225877962 Putative saccharopine dehydrogenase 4/11%/146 MASCOT 131 45.2/5.6 43.5/5.2 Gibberella fujikuroi
27 gi|194669270 Endonuclease reverse transcriptase 23/24%/88 MASCOT   37.8/6.8 150.3/9.7 Bos taurus
28 gi|169625443 Hypothetical protein (triosephosphate isomerase) 5/19%/178 MASCOT   25.4/6.4 27.1/6.1 Phaeosphaeria nodorum
29 gi|255711238 KLTH0B02596p 9/70%/73 MASCOT   39.5/6.0 16.3/5.4 Lachancea thermotolerans
30 gi|154318339 Hypothetical protein (Elongation factor 1β) 2/20%/87 PRO-BLASTd   35.2/4.1 17.7/4.7 Botryotinia fuckeliana
31 gi|67903236 Hypothetical protein (peptidyl-prolyl cis-trans isomerase or cyclophilin 1) 5/35%/168 MASCOT   19.0/8.0 17.8/8.9 Aspergillus nidulans
32 gi|189196154 NADP-specific glutamate dehydrogenase 11/29%/541 MASCOT   46.4/7.2 49.1/5.9 Pyrenophora tritici-repentis
33 gi|145613040 Conserved hypothetical protein (mitochondrial peroxiredoxin PRX1) 4/21%/305 MASCOT   26.0/6.5 25.2/5.7 Magnaporthe grisea
34 gi|156057169 ATP sulfurylase 11/22%/98 MASCOT   74.6/4.4 64.2/6.6 Sclerotinia sclerotiorum
35 gi|169596136 Hypothetical protein (piruvate kinase) 12/28%/271 MASCOT   72.8/6.8 58.4/5.7 Phaeosphaeria nodorum
36 gi|154315126 S-Adenosylmethionine synthetase 5/18%/136 MASCOT   43.9/5.8 58.4/5.7 Botryotinia fuckeliana
37 gi|148361511 Vacuolar serine protease 7/20/115 MASCOT   15.7/6.1 41.0/5.8 Cladosporium cladosporioides
38 gi|85094513 Hypothetical protein (phosphoglyceromutase) 9/17/222 MASCOT   64.5/6.1 57.0/5.4 Neurospora crassa
39 gi|145232889 Hypothetical protein (pyruvate decarboxylase) 6/18/123 MASCOT   75.1/5.3 63.0/6.3 Aspergillus niger
40 gi|116196014 Hypothetical protein (Heat shock 70 kDa protein, mitochondrial) 12/20/369 MASCOT   84.8/5.4 68.2/5.6 Chaetomium globosum
41 gi|258575103 3'(2'),5'-Bisphosphate nucleotidase 10/25/335 MASCOT   41.5/5.6 38.1/5.0 Uncinocarpus reesii
42 gi|258577135 Rab GPD dissociation inhibitor alpha 9/25/396 MASCOT   61.8/5.5 52.0/5.7 Uncinocarpus reesii
43 gi|255936655 Pc13g09300 (pyruvate decarboxylase) 7/19/107 MASCOT   75.4/5.4 63.3/5.7 Penicillium chrysogenum
44 gi|114321348 Peptidoglycan synthetase FtsI 11/17/93 MASCOT   30.6/6.9 62.7/8.0 Alkalilimnicola ehrlichii
45 gi|39945784 Hypothetical protein (UDP-glucose 4-epimerase Gal10) 5/15/344 MASCOT 323 39.8/6.6 40.9/5.9 Magnaporthe grisea
46 gi|6647556 3-Isopropylmalate dehydrogenase A 5/16/198 MASCOT   41.4/5.8 38.8/5.7 Aspergillus niger
47 gi|74627960 Mannitol-1-phosphate 5-dehydrogenase 7/17/191 MASCOT   45.7/5.7 43.7/6.0 Alternaria alternata
48 gi|255942351 Hypothetical protein (UDP-galactoyranose mutase) 9/21/250 MASCOT   60.1/7.0 57.2/5.6 Penicillium chrysogenum
49 gi|145232889 Hypothetical protein (pyruvate decarboxylase) 6/18/118 MASCOT   74.0/5.9 63.0/6.3 Aspergillus niger
50 gi|576627 Alcohol dehydrogenase 4/16/240 MASCOT   36.0/8.2 37.6/6.4 Candida albicans
51 gi|255933774 Pc12g14620 (flavohemoprotein) 04/08/1972 PRO-BLASTe   42.5/7.5 46.0/6.0 Penicillium chrysogenum
52 gi|261359248 Aldose reductase 02/05/1991 PRO-BLASTf   37.0/7.5 33.6/5.4 Verticillium albo-atrum
53 gi|242812056 Alcohol dehydrogenase 04/06/1999 PRO-BLASTg   36.1/8.1 38.9/6.0 Talaromyces stipitatus
  1. aThe assignment of the biological or enzymatic function to the hypothetical proteins (based on BlastP analyses) is shown between parentheses and in italic characters.
  2. bNumber of peptides matched/Sequence coverage (%)/Score
  3. cTotal and best ion scores are shown for proteins showing a sequence coverage value less than 15%
  4. dTwo best peptides (PRO-BLAST): SYLVGYASPKADV/APDAAKFPHAAR
  5. eTwo best peptides (PRO-BLAST): RDPIIAEHGNTITTR/SMAPHINHIAATRNPVR
  6. fTwo best peptides (PRO-BLAST): DIGTDYVDLYLIHDAKKTGGR/ALGLSNFSR
  7. gTwo best peptides (PRO-BLAST): EFPANEDHIAFAAR/KIVHPPKVR