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Table 3 Selection of biotinylated proteins identified in reactive lymphoid hyperplasia (RLH, n = 3) and Hodgkin lymphoma (HL, n = 4)

From: Identification of stromal proteins overexpressed in nodular sclerosis Hodgkin lymphoma

Swiss Prot #

Protein Name

RLH (/3)

SC

HL (/4)

SC

Location

Biological Process

P23142

Fibulin 1

0

0

2

3

EC

Cell growth and/or maintenance

P13611

Versican

0

0

2

4

EC

Cell growth and/or maintenance

P00488

Coagulation factor XIII A1

0

0

3

5

EC, C, N

Metabolism, Transferase activity

P15531

Nucleoside diphosphate kinase A

1

3

3

7

C, N, EC, M

Metabolism; Energy pathways

P11678

Eosinophil peroxidase

0

0

3

11

C, E

Immune response

P02790

Hemopexin

0

0

4

17

E

Transport

Q15063

Periostin, Osteoblast Specific Factor-2

1

3

4

51

EC

Cell communication; Signal transduction

P05109

S100 Calcium binding protein A8

1

2

4

16

C, EC, PM

Cell communication; Signal transduction

O43399

Tumor protein D52-L2

1

3

4

10

UK

Unknown

  1. The proteins are identified from the SwissProt database with Mascot. The numbers in bold indicate in how many runs each protein was detected. SC: Spectral counting (italicized numbers represent the number of redundant spectra identifying the same protein or group of protein). Function and location of the proteins is determined using the Human Protein Reference Database (http://www.hprd.org). C: cytoplasm, E: endosome, EC: extracellular, G: Golgi, M: mitochondrion, N: nuclear, PM: plasma membrane, UK: unknown.