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Table 3 Changes in regulation of inflammation (ROI) proteins (as compared to KO baseline).

From: In vivo rescue of alveolar macrophages from SP-A knockout mice with exogenous SP-A nearly restores a wild type intracellular proteome; actin involvement

Gel No.

Protein Name

KO 6 hr SP-A

KO 18 hr SP-A

WT

5

Alpha-fetoprotein

↑*

↑*

↑

6

Annexin A2

↓*

↓*

↓*

7

Alpha-fetoprotein

↓

↓

↓

16

Chia protein

↓

↑

↓

17

Chitinase 3-like 3 precursor (Ym1)

↑

↓*

↓*

18

Chitinase-related protein MCRP

↑

↑

↓

24

Eno1 protein (Alpha-enolase)

↑

↓

↓

25

Eukaryotic translation initiation factor 5A

↑

↑

↑

34

Heat shock protein 1, beta (HSP90AB1)

↑

↓

↓

35

Heat shock protein 5 precursor (GRP78)

↑

↓*

↓

36

Heat shock protein 65 (HSP60)

↓

↓*

↓*

37

Heat shock protein 8 (HSC70, HSC71)

↑

↑

↓

38

Heat shock protein 90, beta (Grp94), member 1

↓

↓*

↓*

39

Hematopoietic cell specific Lyn substrate 1

UN

↑

↑

40

Heme-binding protein

↓

↓

↓*

42

High mobility group 1 protein

↑

↓

↑

53

p50b; Leukocyte-specific protein 1 (LSP1)

↓

↓

↓

72

Tyrosine 3/tryptophan 5-monooxygenase activation protein, ε

↑

↓

↓

73

Tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, β

↑

↓

↓

76

Vimentin

↑

↓

↓*

 

Total changes

7↓, 12↑, 1UN

14↓, 6↑

16↓, 4↑

 

Total significant changes

1↓*, 1↑*

5↓*, 1↑*

6↓*

  1. Comparison of mean normalized volumes (see Additional File 4) for proteins from KO mice to KO 6 hr SP-A, KO 18 hr SP-A, and wild-type mice. Increased (↑), decreased (↓), unchanged (UN), determined to be significant (p < 0.05) by t-test (*).