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Figure 6 | Proteome Science

Figure 6

From: ATPsite: sequence-based prediction of ATP-binding residues

Figure 6

Comparison of predictions for chain A of phosphofructokinase6 (PDB id 3CQD). Solid lines at the top show the predicted probabilities for PSSM+SVM (in red), rate4site (green), and ATPsite (blue). The dashed lines denote cut-offs used to binarize the probabilities and the corresponding binary predictions are shown using dots (one dot per residue) at the bottom. Black dots denote native ATP-binding residues, and blue, red, green and gray denote predictions from ATPsite, PSSM+SVM, rate4site and BLAST, respectively.

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