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Table 3 Most highly common differentially upregulated and downregulated proteins in LGG

From: Label-free quantitative proteomic analysis of the inhibition effect of Lactobacillus rhamnosus GG on Escherichia coli biofilm formation in co-culture

Upregulated protein Protein ID p value Log2FC Protein description
CCE29_04955 A0A1Y0DVK9 2.40E-05 1.76 Pilus assembly protein
LRHMDP2_922 K8QM21 4.30E-05 1.15 NADPH:quinine reductase related Zn-dependent oxidoreductase
CCE29_07950 A0A1Y0DXE7 9.90E-05 2.01 Iron-sulfur cluster biosynthesis family protein
AAULR_10650 F3N0G5 1.11E-04 3.68 Membrane protein
CCE29_03735 A0A2A5L8F8 1.23E-04 4.07 ABC transporter substrate-binding protein
CCE29_04965 A0A1Y0DVP1 2.67E-04 2.78 Pilus assemble protein
N507_1524 A0A249N5Y8 6.08E-04 0.80 Uncharacterized protein
LRHMDP2_518 K8QF03 7.93E-04 1.54 Uncharacterized protein
purD A0A1Y0DZS2 1.60E-03 1.79 Phosphoribosylamine-glycine ligase
purM A0A1Y0DZP0 1.63E-03 1.79 Phosphoribosylfomyglycinamidine cyclo-ligase
Downregulated protein Protein ID p value Log2FC Protein description
rpoC K8QEG2 8.00E-06 −0.55 DNA-directed RNA polymerase subunit beta′
secA A0A249DE52 9.30E-05 −0.87 Protein translocase subunit SecA
murB A0A3S4R547 2.81E-04 −2.82 UDP-N-acetylenolpyruvoylglucosa mine reductase
murF A0A2A5L3G4 3.21E-04 −0.82 UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase
rplV K8Q8J1 3.43E-04 −0.96 50S ribosomal protein L22
ddl A0A1Y0DWH7 3.73E-04 −1.54 D-alanine-D-alanine ligase
LRHMDP2_1796 K8Q7G6 4.26E-04 −2.21 6-phospho-beta-glucosidase
N507_1229 A0A249N444 4.62E-04 −2.42 50S ribosomal protein L16
ackA K8Q7E5 8.56E-04 −0.64 Acetate kinase
lpdA A0A1Y0DTI9 1.75E-03 −1.08 Outer membrane protein A