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  1. Research

    Removal of SDS from biological protein digests for proteomic analysis by mass spectrometry

    Metal-organic frameworks (MOFs - MIL-101) are the most exciting, high profiled developments in nanotechnology in the last ten years, and it attracted considerable attention owing to their uniform nanoporosity,...

    Soundharrajan Ilavenil, Naif Abdullah Al-Dhabi, Srisesharam Srigopalram, Young Ock Kim, Paul Agastian, Rajasekhar Baaru, Ki Choon Choi, Mariadhas Valan Arasu, Chun Geon Park and Kyung Hun Park

    Proteome Science 2016 14:11

    Published on: 6 September 2016

  2. Research

    Differential proteins among normal cervix cells and cervical cancer cells with HPV-16 infection, through mass spectrometry-based Proteomics (2D-DIGE) in women from Southern México

    Cervical cancer (CC) is the fourth most common cancer in women worldwide with an estimated 528,000 new cases in 2012. The same year México had an incidence of 13,960 and a mortality of 4769 cases. There are se...

    Idanya Serafín-Higuera, Olga Lilia Garibay-Cerdenares, Berenice Illades-Aguiar, Eugenia Flores-Alfaro, Marco Antonio Jiménez-López, Pavel Sierra-Martínez and Luz del Carmen Alarcón-Romero

    Proteome Science 2016 14:10

    Published on: 5 September 2016

  3. Research

    The association of plasma cystatin C proteoforms with diabetic chronic kidney disease

    Cystatin C (CysC) is an endogenous cysteine protease inhibitor that can be used to assess the progression of kidney function. Recent studies demonstrate that CysC is a more specific indicator of glomerular fil...

    Hussein N. Yassine, Olgica Trenchevska, Zhiwei Dong, Yara Bashawri, Juraj Koska, Peter D. Reaven, Randall W. Nelson and Dobrin Nedelkov

    Proteome Science 2016 14:7

    Published on: 25 March 2016

  4. Research

    Stathmin involvement in the maternal embryonic leucine zipper kinase pathway in glioblastoma

    Maternal Embryonic Leucine Zipper Kinase (MELK) is a serine/threonine kinase involved in cell cycle, differentiation, proliferation, and apoptosis. These multiple features are consistent with it being a potent...

    Suely Kazue Nagahashi Marie, Sueli Mieko Oba-Shinjo, Roseli da Silva, Marcela Gimenez, Gisele Nunes Reis, Jean-Pierre Tassan, Jose Cesar Rosa and Miyuki Uno

    Proteome Science 2016 14:6

    Published on: 11 March 2016

  5. Research

    Analysis of the immune response of human dendritic cells to Mycobacterium tuberculosis by quantitative proteomics

    The cellular immune response for Mycobacterium tuberculosis (M. tuberculosis) infection remained incompletely understood. To uncover membrane proteins involved in this infection mechanism, an integrated approach ...

    Chiu-Ping Kuo, Kuo-Song Chang, Jue-Liang Hsu, I-Fang Tsai, Andrew Boyd Lin, Tsai-Yin Wei, Chien-Liang Wu and Yen-Ta Lu

    Proteome Science 2016 14:5

    Published on: 8 March 2016

  6. Methodology

    Label-free proteomic methodology for the analysis of human kidney stone matrix composition

    Kidney stone matrix protein composition is an important yet poorly understood aspect of nephrolithiasis. We hypothesized that this proteome is considerably more complex than previous reports have indicated and...

    Frank A. Witzmann, Andrew P. Evan, Fredric L. Coe, Elaine M. Worcester, James E. Lingeman and James C. Williams Jr

    Proteome Science 2016 14:4

    Published on: 27 February 2016

  7. Research

    Analysis of protein expression in periodontal pocket tissue: a preliminary study

    The periodontal disease is caused by a set of inflammatory disorders characterized by periodontal pocket formation that lead to tooth loss if untreated. The proteomic profile and related molecular conditions o...

    Emanuela Monari, Aurora Cuoghi, Elisa Bellei, Stefania Bergamini, Andrea Lucchi, Aldo Tomasi, Pierpaolo Cortellini, Davide Zaffe and Carlo Bertoldi

    Proteome Science 2015 13:33

    Published on: 30 December 2015

  8. Research

    Gender-specific effects of intrauterine growth restriction on the adipose tissue of adult rats: a proteomic approach

    Intrauterine growth restriction (IUGR) may program metabolic alterations affecting physiological functions and lead to diseases in later life. The adipose tissue is an important organ influencing energy homeos...

    Adriana Pereira de Souza, Amanda Paula Pedroso, Regina Lúcia Harumi Watanabe, Ana Paula Segantine Dornellas, Valter Tadeu Boldarine, Helen Julie Laure, Claudia Maria Oller do Nascimento, Lila Missae Oyama, José Cesar Rosa and Eliane Beraldi Ribeiro

    Proteome Science 2015 13:32

    Published on: 2 December 2015

  9. Research

    Hepatocytes respond differently to major dietary trans fatty acid isomers, elaidic acid and trans-vaccenic acid

    It has been discussed if the adverse health effect associated with the ingestion of trans fatty acids correlates with the food source, as the composition of the isomers varies in different foods. We have investig...

    Toke P. Krogager, Lone Vendel Nielsen, Derya Kahveci, Thomas F. Dyrlund, Carsten Scavenius, Kristian W. Sanggaard and Jan J. Enghild

    Proteome Science 2015 13:31

    Published on: 1 December 2015

  10. Research

    Differential abundance analysis of mesocarp protein from high- and low-yielding oil palms associates non-oil biosynthetic enzymes to lipid biosynthesis

    The oil palm Elaeis guineensis Jacq. which produces the highest yield per unit land area of the oil crops is the most important commercial oil crop in South East Asia. The fleshy mesocarp of oil palm fruit, where...

    Tony Eng Keong Ooi, Wan Chin Yeap, Leona Daniela Jeffery Daim, Boon Zean Ng, Fong Chin Lee, Ainul Masni Othman, David Ross Appleton, Fook Tim Chew and Harikrishna Kulaveerasingam

    Proteome Science 2015 13:28

    Published on: 26 November 2015

  11. Methodology

    Beads-free protein immunoprecipitation for a mass spectrometry-based interactome and posttranslational modifications analysis

    Protein immunoprecipitation (IP) coupled with MS provides means to interrogate protein complexes and their posttranslational modifications (PTMs). In a typical protein IP assay antibodies are conjugated to pro...

    Michal Mikula, Tymon Rubel, Jakub Karczmarski, Malgorzata Statkiewicz, Karol Bomsztyk and Jerzy Ostrowski

    Proteome Science 2015 13:23

    Published on: 2 September 2015

  12. Research article

    Proteome analysis of shell matrix proteins in the brachiopod Laqueus rubellus

    The calcitic brachipod shells contain proteins that play pivotal roles in shell formation and are important in understanding the evolution of biomineralization. Here, we performed a large-scale exploration of ...

    Yukinobu Isowa, Isao Sarashina, Kenshiro Oshima, Keiji Kito, Masahira Hattori and Kazuyoshi Endo

    Proteome Science 2015 13:21

    Published on: 15 August 2015

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